Gene Rsph17025_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2960 
Symbol 
ID5085163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3024246 
End bp3025256 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID640484531 
Producttransposase, IS4 family protein 
Protein accessionYP_001169151 
Protein GI146278992 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0662876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGCCTC GGGCGTCCGA GCGACGCATA TCCCTACAGG CTCTTGCCCG GCCGGCCGCG 
GGGCATCCTG AACCGGGGTG CCGGTGCAAG ACGGCGCGGA GCGTTCAATA CTCTGAACAG
GCGGCGGCAA TACCTCAGGC GCATTTCAGC GGTCATGGGG CTGCGTGCCG TGGAAAGCGG
TTCTTCCGGG CGAGACTGTT TCTAGGGTCA GGACCCATTG ATCTTGCTTC TGCGGCAACG
ATGAGCAACC TTTTCTGGCT GACCGACGCA CAGATGGCGC GGCTTCAACC CTTCTTTCCC
AAGAGCCATG GCAAGCCGCG CGTCGATGAC CGGCGTGTGT TGAGCGGGAT AATCTTCATC
AACCGCAATG GCTTGCGGTG GTGTGATGCG CCCAAGGAGT ATGGTCCGCC AAAGACCCTC
TACAACCGCT GGAAGCGGTG GAGCGACAAG GGGGTCTTCG CCCGGATGAT GGTTGGGCTG
GCTGCCGAGG CCGCTGTGCC GAAGACGGTG ATGATCGACG CGACCTATCT CAAGGCGCAT
CGCACGGCGA CCAGCCTGCG GTCGAAAAAG GGGGGGGCAG GCGACCAGAG GGGCCGTCTG
ATTGGCCGCA CGAAGGGTGG CATGAACACC AAGCTTCATG CCGTCACCGA TGCCGATGGC
CGACCGATCC GGTTCTTCAT GACCGCAGGC CAAGTCAGCG ACTACACCGG CGCGGCAGCT
CTGCTGAGCA GTCTGCCCGC GGCGGAGTGG CTGCTGGCCG ACCGGGGCTA CGATGCCGAC
TGGTTCAGGG AAGCGTTGAA AGACAAGGGG ATAAAGCCCT GCATTCCCGG CAGGAAGTCG
CGCGGCAAGC CAATCAAGCA CGACAAGCGC CGTTACAAGC GCCGCAACAG GATCGAGATC
ATGTTCGGGC GCCTGAAGGA CTGGCGCCGC GTCGCTACAC GCTACGACCG ATGCCCGAAG
GTCTTCCTCT CCGCCGTCGC CCTCGCCGCA ACCGTCATGT TCTGGCTATG A
 
Protein sequence
MGPRASERRI SLQALARPAA GHPEPGCRCK TARSVQYSEQ AAAIPQAHFS GHGAACRGKR 
FFRARLFLGS GPIDLASAAT MSNLFWLTDA QMARLQPFFP KSHGKPRVDD RRVLSGIIFI
NRNGLRWCDA PKEYGPPKTL YNRWKRWSDK GVFARMMVGL AAEAAVPKTV MIDATYLKAH
RTATSLRSKK GGAGDQRGRL IGRTKGGMNT KLHAVTDADG RPIRFFMTAG QVSDYTGAAA
LLSSLPAAEW LLADRGYDAD WFREALKDKG IKPCIPGRKS RGKPIKHDKR RYKRRNRIEI
MFGRLKDWRR VATRYDRCPK VFLSAVALAA TVMFWL