| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2890 |
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| Symbol | |
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| ID | 5083238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2945202 |
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| End bp | 2946791 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640484460 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001169081 |
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| Protein GI | 146278922 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.271762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT TGCCGCTCCG CACCGGGGCC TGTCTTCTCG CGATGATCGT TGCAGGCGCC
GGCGCTGCCG CCGCGCAGGT GACCCTTGTC CGGGGCAACG ACACCGATCC CGCGACGCTC
GACCATCACC TGACCTCGAC CGTGGCCGAG AGCCGGATCC TGAACGATCT CTACGAGGGG
CTCGTGGTGC AGGATGCGCG GGGCGAGGTG GTGCCGGGGG TGGCCGAGAG CTGGGAGATC
TCGGAGGATG GTCTGACCTA CAGCTTCAAG CTGCGCGACG ATGCGAAATG GTCGAATGGC
GATCCGGTGG TGGCCGGAGA CTTCGTCTTC GCGCTGCGCC GGATCGTGAC GCCCGCGACG
GCGGCGGTCT ATGCCAACAT CCTCTACCCG ATCCTGAACG CCGAAGCCGT CGCCTCGGGC
CAGATGACCC CGGAAGAGCT GGGGGTCGAG GCGGTGGATG ATCATACGCT GCAAATCACC
CTGAACGCGC CCACCCCCTA CTTCCTCGAA CTGCTCACGC ACCAGTCCTC GCTGCCGCTG
CACCCGGCGA CGGTCGAGGC GGAAGGCGCG AACTTCACGC GGCCCGGCGT GATGGTCACG
AACGGCGCCT ACAAGCTGGT CAGCTTCGTG CCGAACGACC GCATCGTCAT GGAGAAGAAT
GAGCATTTCC ACGGCGCGCA GGACATCGCC GTCGATCGCG TCGAATGGGT GCCCTTCGAG
GATCGCTCGG CCTGCCTGCG GCGCTTCGAG GCGCAGGAGG TGCAGATCTG CACCGACGTG
CCCGCCGAAC AGATGAGCTA CATGCGCCAG AACCTCGGCG AGCAGCTGCG CATCGCGCCC
TACCTCGGCA CCTACTACCT GCCGGTGAAG GGCGCCGACG GCAGCCCGCT CAAGGACAAG
CGCGTGCGTC AGGCGATCTC GCTCGTGCTC GACCGCGACT TCATCGCCGA GCAGGTCTGG
CAGGAGACGA TGCTGCCCGG CTACTCGATC GTCCCGCCGG GCATCTCGAA CTATGTCGAG
ACGCCCCCCT CGCTCGATTA TGCCGAAGAG GATCTGCTTG ACCGCGAGGA CCGGGCCAAG
GCGCTCCTTG AGGAAGCGGG CGTGGCCGAG GGCAGCCTGA CCGTGCAGCT CTCCTACAAC
TCGTCCGAGA ACCATCGCAA TACGATGACC GCCATCGCCG ACATGCTGAA GAACATCGGC
ATCAACGCGA CGCTGAACGA GATGGAGGGG ACGAACTACT TCAACTACCT CAAGGAAGGC
GGCGCCTTCG ACATCGTGCG CGCGGGCTGG ATCGGCGACT ATTCCGACCC GCAGAACTTC
CTGTTCCTGT TCGAGGGCGG CGTGCCCTTC AACTATCCGC GCTGGGAGAA CGCCGATTAC
GACGCGCTGA TGGACAGGGC CGCCCAGACC CAGGATCTCG ACGAGCGGGC ACAGATCATG
GCCGAGGCCG AGACGATCCT GCTCGACGAG GTGCCGGCGA TCCCGCTGCT CACCTACTCC
TCGCGCGCGC TCGTTTCGGA CCGGGTGCAG GGCTACGAGG ACAACCTGCC CGACGTCCAC
CAGACCCGCT GGCTCTCGCT GTCCCAGTAA
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| Protein sequence | MTRLPLRTGA CLLAMIVAGA GAAAAQVTLV RGNDTDPATL DHHLTSTVAE SRILNDLYEG
LVVQDARGEV VPGVAESWEI SEDGLTYSFK LRDDAKWSNG DPVVAGDFVF ALRRIVTPAT
AAVYANILYP ILNAEAVASG QMTPEELGVE AVDDHTLQIT LNAPTPYFLE LLTHQSSLPL
HPATVEAEGA NFTRPGVMVT NGAYKLVSFV PNDRIVMEKN EHFHGAQDIA VDRVEWVPFE
DRSACLRRFE AQEVQICTDV PAEQMSYMRQ NLGEQLRIAP YLGTYYLPVK GADGSPLKDK
RVRQAISLVL DRDFIAEQVW QETMLPGYSI VPPGISNYVE TPPSLDYAEE DLLDREDRAK
ALLEEAGVAE GSLTVQLSYN SSENHRNTMT AIADMLKNIG INATLNEMEG TNYFNYLKEG
GAFDIVRAGW IGDYSDPQNF LFLFEGGVPF NYPRWENADY DALMDRAAQT QDLDERAQIM
AEAETILLDE VPAIPLLTYS SRALVSDRVQ GYEDNLPDVH QTRWLSLSQ
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