| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2869 |
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| Symbol | |
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| ID | 5084247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2924159 |
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| End bp | 2926045 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640484439 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001169060 |
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| Protein GI | 146278901 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTCA TGGACGATCA GAACAAGAAC CTCATCCTGG CGACCGGACT CAGCTTCCTC
GTGATCATGG TCTGGTTCTT CCTGTTCCCG CCTCCCGAGG CGGTGACGCA GGACGAGCCC
GCCACTGTCG CGACGCAGGA AACGGCGCTG GCTCCTTCGG CCACTCCGGA TGCGCCCATG
ACCGCGGTGC CGCCCGACGC AGAACTGCCC GAGACGCCGC GTGTCGCGAT CGACACGCCC
CGGCTGCAGG GCTCGATCTC GATGCTGGGC GGGCGGATCG ACGATCTCTC GCTCAAGTCG
TACCACGAGA CGCTGGACCC CGGCTCGCAG ATCGTCCGCC TGCTCTCGCC GGTGGGCGAA
CCGAATGCCT ACTATGCGCT CTACGGCTGG ACCCCGGCCG GTGCGCTCGA CTATGAGGAT
GTGCCCGGCG CCAACACGAC CTGGACCCAG GTCGGCGGCG CGACCCTCGG CGTGGACCAG
CCGGTCACGC TGGAATGGGA CAATGGCCAG GGCCTCGTCT TCACGCGGAC GATCTCGGTC
GATGACCACT ACATGTTCAC CATCTCGCAG ACGGTCGAGA ACCGGACGGG CGAGGCTGTC
CGCCTCGCGC CCTACGGGAT CGTGGCGCGC CATGGGAAGC CTCTGAACCT GCAGAACTTC
TTCGTGCTGC ACGAGGGTGC GGTGGGCCGC GCCGACGGCG AGCTGACCGA GACCAATTAC
GACGACATCG CCGAGCTGCC GCAGGTTGCG CGCGAAGGGG CGCTGGCCGA GGTGGTCGAG
GCGCAGCAGG ACGGCTGGAT CGGCTTCACC GACAAGTACT GGATGACGAC ACTGATCCCG
CAGCAGGGCC AGCCCTTCAG CAGCGTGACC AAATACGTCC CGGGCGCAGA CATCTACCAG
GCCGAGACCC GTGAGCAGCT CGTCACCGTC GCGCCCGGAG GCACGGCGGA AGTCAGCTCG
CGCCTCTTTG CCGGCGCCAA GGAATGGGAA GCCATCCGCG CCTACCAGAA CGAAGGCGCG
ATCGAGCCGA CCGAGGGCGC CGAGCCGATC CCGGGCTTCA TCGACTCGAT CGACTGGGGC
TGGTTCTTCT TCCTGACCAA GCCGATCTTT GCGGTGCTGC ACTGGCTGAA CCAGATGATC
GGCAACATGG GTCTGGCCAT CATCGCCCTG ACCTTCCTGC TCAAGGCGCT CGTCCTGCCG
CTGGCCTACA AGTCCTACGT CTCGATGGCG CGGATGAAGG AGCTGCAGCC CGAGCTCGAG
GCGCTCCGCG AGCGCGCGGG CGAAGACAAG ATGCTCATGC AGCGCGAGAT GATGCGGCTC
TACAAGGAAA AGCAGGTCAA CCCCGCCGCG GGCTGCCTGC CGATCCTGAT CCAGATCCCG
ATCTTCTTCT CGCTCTACAA GGTGATCTTC GTCACGATCG AACTGCGCCA CGCCCCCTTC
TTCGGCTGGC TCACGGACCT CTCGGCGCCC GACCCGTCCT CGATCTTCAA CTTCTTCGGA
CTGGCCCCCT GGGCGGCACC GACGCCCGGC TCGACCATGG CGCTGATCTT CATCGGGATC
CTGCCGATCC TGCTCGGCAT CTCGATGTGG CTTCAGCAGA AGCTGAATCC GGCACCCACC
GACAAGGCGC AGGCGATGAT CTTCGCCTGG ATGCCATGGG TGTTCATGTT CATGCTCGGC
CACTTCGCCT CGGGCCTGGT GCTCTACTGG ATCGTCAACA ACGTGATCAC CTTCTCGCAG
CAGTATGTGA TCATGCGCAG CCACGGCCAC CACCCGGACC TGTTCGGCAA CATCAAGGCC
GGTTTCAGCC GCAAGTCGGC CGCTCAGGGC GCCGGCAAGG CTGCGAACGA CAGCCGTCCG
CCTGCGGCGA AGAAGCGGAA ACCATGA
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| Protein sequence | MSFMDDQNKN LILATGLSFL VIMVWFFLFP PPEAVTQDEP ATVATQETAL APSATPDAPM
TAVPPDAELP ETPRVAIDTP RLQGSISMLG GRIDDLSLKS YHETLDPGSQ IVRLLSPVGE
PNAYYALYGW TPAGALDYED VPGANTTWTQ VGGATLGVDQ PVTLEWDNGQ GLVFTRTISV
DDHYMFTISQ TVENRTGEAV RLAPYGIVAR HGKPLNLQNF FVLHEGAVGR ADGELTETNY
DDIAELPQVA REGALAEVVE AQQDGWIGFT DKYWMTTLIP QQGQPFSSVT KYVPGADIYQ
AETREQLVTV APGGTAEVSS RLFAGAKEWE AIRAYQNEGA IEPTEGAEPI PGFIDSIDWG
WFFFLTKPIF AVLHWLNQMI GNMGLAIIAL TFLLKALVLP LAYKSYVSMA RMKELQPELE
ALRERAGEDK MLMQREMMRL YKEKQVNPAA GCLPILIQIP IFFSLYKVIF VTIELRHAPF
FGWLTDLSAP DPSSIFNFFG LAPWAAPTPG STMALIFIGI LPILLGISMW LQQKLNPAPT
DKAQAMIFAW MPWVFMFMLG HFASGLVLYW IVNNVITFSQ QYVIMRSHGH HPDLFGNIKA
GFSRKSAAQG AGKAANDSRP PAAKKRKP
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