| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2844 |
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| Symbol | |
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| ID | 5084222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2899302 |
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| End bp | 2900906 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640484414 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001169035 |
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| Protein GI | 146278876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.922612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.415189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACC CCACGGGCCC CATCGGCGGG CCGATCCCGG TGCGGGCCCT GGGCCTCGCA
CCCTCGCGGC GGGCCTTTCT CGGCGGCGCG GCCGTCCTGG CCGGCGCCTT CTGCCTGCCC
GCCTCGCTCC GGGCCGAGGA AGGGCCGAAG CGGGGCGGCC GGCTGCGCTA CGGCGTCAAT
GACGGCTCGC AGCAGGATTC GCTCGAGCCC GGAAGCTGGG CGACGGTGAT GTGCGGCGCG
GCCTTCAACG GGGCGCTCTG CAACAACCTC GTCGAGCTTT TGCCGGACGG GTCGCTGGCG
GGCGATCTGG CCGAACGCTG GGAGGAGGCG GAGGGGGCGA CCCGCTGGAC CTTCACGCTG
CGCAAGGGCG TGACCTTCCA CGACGGACGC CCCTTCACGC CCGAGGATGC GCGGCAATCG
CTGCTTCACC ACATGGGCGA AGACAGCACC TCGGGCGCGC TCGCCATCGT CAGCCAGATC
AAGGAGATCG CGGTCGAGGG CGAGGATCGG CTGATCGTGA CACTCACGCA GGGCAATGCC
GACTTCCCCT ATCTGCTGTC AGACTATCAC CTCTCGATCT TCCCGGCGAA GGAGGGGGGC
GGCATCGACT GGGAAAGCGG CATCGGCACC GGCGCCTTCC GGCTGGACAG TTTCGAGCCC
GGCGTCGCGG TCCGGCTGGT CCGCAATCCC CGCTATCACA AGCCCGGCCT GCCGCATTTC
GACGAGGTCG AGTTCATCGC GATCCCCGAC CGGGCGGCCC GGCTGAATGC GCTGCTGACC
GGCGAGGTCG ATGTGATCGA GGATCTCGAC ATCCGCAACG TCCCCCTCAT CGAGCGCAAC
CCCGATCTGG TGCTGCACCG CACGCCCAGC CTGCGGCACC TGACCTTTGA CATGAACTGC
CAGACGGCGC CCTTCGACCA TCCGGCGGTG CGTCAGGCCC TGAAGCTCAG CCTCGACCGC
GAGGATGTGA TCGCCAAGGT CTTCCTCGGC GAGGGCGAGA CCGGCAACGA CAATCCGGTG
GCGCGGATCA TGCCCTTCTG GGCCGAGACG CCGCCCGAGC ACCGCTACGA CCCCGAGGCC
GCGCGGGCGC TTCTGGCCGA GGCCGGGATC GAGGGGCTCA CGGTCGATCT CTCGGTCGCG
GAGTCGGCCT TCCCCGGCGC GGTCGAGGCG GGGGTGCTGT TCCGCGAGCA TGCGGCGCGC
GCCGGCATCA CCATCAACCT CGTGCAGGAG GCCGATGACG GCTACTGGGA CAATGTCTGG
CTGGTGAAGC CCTTCAACGC CGCGGACTGG TACGGGCGGG TCACGCTCGA CTGGCTGTTC
GCGACCTCCT ACACGTCCGA CGCACCCTGG AACAACACGG GGTTCAGGAA CGCCCGCTTC
GACGAGCTGC ACGCCAAGGC CCGGTCGGAG ACCGAACCCG CAAAGCGCGG CGCGCAGTAT
GCCGAGATGC AGCAGATCCT GCATAACGAG GGCGGCGTGA TCACGGTGGC CTTCGTCTCC
TGGCTCCTCG CCATGTCCCG TGCCATCGGC CATGGCGAGA CCGGAGGGAT CCTGCCCGCC
GACAATCACC GCTGCGCCGA GCGATGGTGG CGCACCGACA TCTGA
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| Protein sequence | MRYPTGPIGG PIPVRALGLA PSRRAFLGGA AVLAGAFCLP ASLRAEEGPK RGGRLRYGVN
DGSQQDSLEP GSWATVMCGA AFNGALCNNL VELLPDGSLA GDLAERWEEA EGATRWTFTL
RKGVTFHDGR PFTPEDARQS LLHHMGEDST SGALAIVSQI KEIAVEGEDR LIVTLTQGNA
DFPYLLSDYH LSIFPAKEGG GIDWESGIGT GAFRLDSFEP GVAVRLVRNP RYHKPGLPHF
DEVEFIAIPD RAARLNALLT GEVDVIEDLD IRNVPLIERN PDLVLHRTPS LRHLTFDMNC
QTAPFDHPAV RQALKLSLDR EDVIAKVFLG EGETGNDNPV ARIMPFWAET PPEHRYDPEA
ARALLAEAGI EGLTVDLSVA ESAFPGAVEA GVLFREHAAR AGITINLVQE ADDGYWDNVW
LVKPFNAADW YGRVTLDWLF ATSYTSDAPW NNTGFRNARF DELHAKARSE TEPAKRGAQY
AEMQQILHNE GGVITVAFVS WLLAMSRAIG HGETGGILPA DNHRCAERWW RTDI
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