Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2671 |
Symbol | aroE |
ID | 5084459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2712947 |
End bp | 2713786 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484234 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001168863 |
Protein GI | 146278704 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.134722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.358722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAC ATATGCGCAT CCCGCTTGCG GGGGTGATCG GATCGCCCAT CGCCCACAGC CGTTCGCCGG CCCTGCACGG CTACTGGCTG AAACGCTACG GCCTGAAGGG CCACTACATC CCCATGGATG TGGCCCAGGC CGACCTGCGC GAGGTGCTGG CCGCGATGCC GCGGATGGGG TTCGTCGGCT GCAACGTGAC GATCCCGCAC AAGGAGACGG TGATTGCGCT GGCCGACATC GTCACCGACC GGGCCGCGCT GATCGGGGCC GCCAACACGC TGATCTTCCG CAAGGACGGC AAGATCCACG CCGACAACAC GGACGGGGCG GGATTCACCG CCAACCTGCG CCAGAACGCG CCCGACTGGC AGCCTCAGGC GGCGCCGGCG GTGGTCTGGG GCGCGGGAGG CGCCGCGCGC GCCGTGATCG CGGCCCTGAT CGAGGTGGGC GTGCCCGAGA TCCGGCTGTC GAACCGCAGC CGGGCGCGGG CCGATGCGCT GCGCTCGGAC TTCGGGGCCA AGGTGCAGGT CTTCGACTGG GTTCAGGCCG GCAACATTCT CGAGGATGCG ACGACGGTGG TGAACACGAC CTCGCTCGGC ATGATCGGCA AGCCGGACTT CCGGGTGCCG CTGGATGCGC TGAGCCCGAA GGCCGTCGTG ACCGATCTCG TCTATACACC TCTGCGGACG CGGCTTCTCG CCGAGGCCGA GGCCGCCGGC TGCCGCACGG TGGACGGGCT CGGGATGCTG CTGCATCAGG CCGCGCCGGG GTTCGAGCGG TGGTTCGGGG TGCGGCCGGA GGTGGACGAG GACACCCGGG CCGCCGTGCT GGCGACATGA
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Protein sequence | MTEHMRIPLA GVIGSPIAHS RSPALHGYWL KRYGLKGHYI PMDVAQADLR EVLAAMPRMG FVGCNVTIPH KETVIALADI VTDRAALIGA ANTLIFRKDG KIHADNTDGA GFTANLRQNA PDWQPQAAPA VVWGAGGAAR AVIAALIEVG VPEIRLSNRS RARADALRSD FGAKVQVFDW VQAGNILEDA TTVVNTTSLG MIGKPDFRVP LDALSPKAVV TDLVYTPLRT RLLAEAEAAG CRTVDGLGML LHQAAPGFER WFGVRPEVDE DTRAAVLAT
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