| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2464 |
|---|
| Symbol | |
|---|
| ID | 5083807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2513255 |
|---|
| End bp | 2513833 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640484026 |
|---|
| Product | DNA-3-methyladenine glycosylase I |
|---|
| Protein accession | YP_001168657 |
|---|
| Protein GI | 146278498 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.291924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCA TACGCTGCCC CTGGTGCGGA CAGGATCCGC TCTACACCGA CTACCATGAC
ACGGAATGGG GCGTTCCCGA GTGGAACTCC CGTGCCCTCT GGGAGAAACT CATCCTCGAC
GGCTTTCAGG CGGGCCTCGC GTGGATTACC ATCCTGAGAA AACGTGAGGC GTTCCGCGCG
GCCTTCGAAG GGTTCGACCC GCTCGTGATC GCCTCCTGGG GTGAGGCCGA GGTGGCGCGG
TTGCTGGCCG ATGCGGGCAT CGTGCGCCAT CGCGGCAAGA TCGAGGCCAC CATCGGCAAT
GCCCGGGCCT TCCTTGCGGT CGAGGAAAAG ACGGCGTTCT CGGACTTCCT CTGGAAGCAT
GTGGACGGGC GGCCGGTGCA GAACCGTTTC GCCAGCATGG CCGAGGTTCC GACCGAGACG
GCCGCCGCGC GGGCCCTGTC GAAGGAGCTG AGGGCGAACG GCTTCCGGTT CTGCGGGCCG
ACCATCACCT ATGCCTTCAT GCAGGCCACC GGCATGGTGA ACGACCATCT GGTGAGCTGC
GCGGCGCATG ACCGCTGCGC CCGGCTGGCC GAGACCTGA
|
|---|
| Protein sequence | MNPIRCPWCG QDPLYTDYHD TEWGVPEWNS RALWEKLILD GFQAGLAWIT ILRKREAFRA
AFEGFDPLVI ASWGEAEVAR LLADAGIVRH RGKIEATIGN ARAFLAVEEK TAFSDFLWKH
VDGRPVQNRF ASMAEVPTET AAARALSKEL RANGFRFCGP TITYAFMQAT GMVNDHLVSC
AAHDRCARLA ET
|
|---|
| |