Gene Rsph17025_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2413 
Symbol 
ID5083645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2460172 
End bp2460888 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID640483975 
ProductGntR family transcriptional regulator 
Protein accessionYP_001168606 
Protein GI146278447 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.224265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.351453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CGATCACGCT GCCGACCCTC GAGGCACCCA TCCGGCCCTC GGTCACGGAT 
CAGGTCTTCG ATCAGTTGCA CGACCGGATC ATCGAGCTTG ACCTGCCCCC CGGCACCAAG
CTCTCCGAGA TCGAGGTCGC GCGTCAGTTC GGCGTCTCGC GCCAGCCGGT GCGCGATGCC
TTCTACCGGC TGTCCAAGCT GGGCTTCCTC GCGATCCGGC CCCAGCGGGC CACGACCGTC
TCACAGATCT CGACCCGCAG CGTCATGCAG GCCCGTTTCA TCCGGGCCGC CATCGAGGCC
GAGACGGTCC GCGTGGCCTG CGAGCGGCTG GCCGAAGCGG ACCATGCCGC GCTCTGGCAG
ATCCTCGACC TTCAGCGCGA GGCCTCCGAA GCAGGCGACC GGCTCCGCTT TCACGCGCTC
GACGACCGGT TTCACCGCGA GATCTGCGAG CGGTCCGGCT GCGGCTTCGC CTGGGAGATC
ATCCGCGAGA ACAAGTCCCA CATGGACCGG GTGCGCTACC TGTCGCTGGC CTTCGCCTCG
AAGGATGCCT ACGCTGACCA TCTCGAGGTG ATGCAGGCCA TCGAGGCGCG CGACGCGCCC
GAGGCGATGC GGCGGATGCA CCGGCACCTC AACCGCATCA AGATCCAGAT CGAGCGGATC
CGCCTCGATC ACCAGAGCTA TTTCGCACAG GAGGACGCAT GTCTGCCCGA TCTCTGA
 
Protein sequence
MTDAITLPTL EAPIRPSVTD QVFDQLHDRI IELDLPPGTK LSEIEVARQF GVSRQPVRDA 
FYRLSKLGFL AIRPQRATTV SQISTRSVMQ ARFIRAAIEA ETVRVACERL AEADHAALWQ
ILDLQREASE AGDRLRFHAL DDRFHREICE RSGCGFAWEI IRENKSHMDR VRYLSLAFAS
KDAYADHLEV MQAIEARDAP EAMRRMHRHL NRIKIQIERI RLDHQSYFAQ EDACLPDL