Gene Rsph17025_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2394 
Symbol 
ID5083627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2443160 
End bp2443882 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID640483957 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001168588 
Protein GI146278429 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0672115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.448912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC CCGAAATCAC CGTCGCGTCC TACAATATCC ACAAGGGCAT CGGCACCGAC 
CGCCGGCGCG ACCTGAGACG CACCTCCGCC GTCATTGCGG AACTGGACGC CGATCTCGTG
GCGCTGCAGG AGGCCGATCG GCGGTTCGGC GACCGGGCGG GGCTGCTCGA CCTCGAACAT
CTGCGCGCCG AGACGGGGCT CGTGCCGGTG CAGGTCGAGG GCAGCGGGCG GGCGCATGGC
TGGCATGGCA ACCTGCTTCT GGTACGGGAG GCTGAAGTCG AGGAGGTGCA CAAGATCGTG
TTGCCGGGCT TCGAGCCCCG CGGGGCGCTG ATGATCGACC TTCTGATGCA TGGCCGGCCG
CTGCGGGTGA TCGCGGCGCA TCTGGGTCTC CTGCCCGGCT CGCGGGCGGC GCAGACGCGC
CACCTGCTCG AACGCATCGA GGCCGGCGCC CCCCGCCCCA CCCTGCTGAT GGGCGACCTG
AACGAATGGC GCGGCTCGGG CGCGGCGATG AGCCATCTCG CGCGGCACTT CACCGGCGCC
GTAATGGTGC GCAGCTTTCC TTCGCGGTTC CCGATCCTGG CGCTGGACCG ACTGATGACC
TGCAAGCACG GACGCCTTCA AGACGTGGTG CCCCATGACA CGCCGCTCGC CCGGCGTGCC
TCGGATCATC TGCCGATCAA GGCCCGGCTT CACCTGCCCG AGCGGATCGC GGCCGCATCA
TGA
 
Protein sequence
MPAPEITVAS YNIHKGIGTD RRRDLRRTSA VIAELDADLV ALQEADRRFG DRAGLLDLEH 
LRAETGLVPV QVEGSGRAHG WHGNLLLVRE AEVEEVHKIV LPGFEPRGAL MIDLLMHGRP
LRVIAAHLGL LPGSRAAQTR HLLERIEAGA PRPTLLMGDL NEWRGSGAAM SHLARHFTGA
VMVRSFPSRF PILALDRLMT CKHGRLQDVV PHDTPLARRA SDHLPIKARL HLPERIAAAS