Gene Rsph17025_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2390 
Symbol 
ID5083623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2438674 
End bp2439864 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID640483953 
Producthydroxyglutarate oxidase 
Protein accessionYP_001168584 
Protein GI146278425 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0316475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.147851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAGCA GCGATTTTGT CATCACCGGC GGCGGCATCG TGGGCCTCGC CACCGCGCTC 
CGCCTTCAGT CCCTGCATCC CGGCGCGCGG ATCACGGTGC TCGAGAAGGA GCCCGCCGTG
GCCCGCCACC AGTCGGGCCG CAATTCGGGC GTGATCCATG CGGGGGTCTA TTACGCCCCC
GGCAGCCACA AGGCCCGCTT CTGCGCCCGT GGCGTGTCCG CGACCAAGGC CTTTTGCGAC
GAGCACGGCA TCCCCTACCG GATCTGCGGC AAGCTGATCG TGGCCACCGA CGCCGCCGAG
CTTGAGCGGA TGGGCGCGCT CGAGACGCGG GCACGGGCCA ACGGCATCGT CATCGAGAGG
CTCTCGGGCG AGGAGGCGCG GAGGCTCGAG CCGAACATCA AGGCGGTGGG GGCGCTTCTG
TCGCCTTCGA CCGGCATCGT CGATTACGGC CGCGTGGCCG AGCGGATGGC CGAGCTGTTC
CGCGACCGTG GCGGCGAGAT CCGGCTCGAC ACCGAGGTGC TGGGCGGCGC CGAATCCGAG
GCGGGGGTGC GGCTCGAGAC CAATGAGGGC GAGTTCTCGG CCGGCAAGGC GGTGTTCTGC
GGCGGCCTTC ATGCCGACCG GCTGGCGCGG GCCTTTGGCG CGAGCCTCGA CTTCCGCATC
GTGCCCTTCC GCGGCGAGTA TTTCGCGATC CGCAACCAGC CCGAGGATCT GGTCCGGCAT
CTGATCTATC CCGTGCCCGA TCCGGCGCGG CCCTTCCTGG GCGTCCATCT GACCCGCAAG
ATGAACGGGG GCTTCACCGT GGGGCCGAAC GCCGTGCTCG CCATGGCGCG CGAGGGCTAC
ACGAACGGCA TCATCTCGGT GAAGGATCTG GCCGACAGCC TGAGCTACAA GGGCTTCTGG
AAGCTCATGC GCCGCAACGC GGGGGCGGCG GCCGAGGAAC TCTCGGCCTC GCTGGTCCGC
CAGCTCTATC TGCGCAAGGT GCACAAATAC TGCGACCGGA TCCGGCTGCA GGATCTGGCG
CCCTACCGGG CCGGGGTGCG GGCGCAGGCG GTGGGAGCGG ACGGGCGCAT GATCGACGAC
TTCGTCTTCG TCCGCACGCG CCACGCGCTT CATGTCTGCA ACGCGCCCTC ACCGGCGGCC
ACTTCGGCGC TGCCCATCGC CGAACATATC GTGGACCAGC TGCTTGCCTG A
 
Protein sequence
MTSSDFVITG GGIVGLATAL RLQSLHPGAR ITVLEKEPAV ARHQSGRNSG VIHAGVYYAP 
GSHKARFCAR GVSATKAFCD EHGIPYRICG KLIVATDAAE LERMGALETR ARANGIVIER
LSGEEARRLE PNIKAVGALL SPSTGIVDYG RVAERMAELF RDRGGEIRLD TEVLGGAESE
AGVRLETNEG EFSAGKAVFC GGLHADRLAR AFGASLDFRI VPFRGEYFAI RNQPEDLVRH
LIYPVPDPAR PFLGVHLTRK MNGGFTVGPN AVLAMAREGY TNGIISVKDL ADSLSYKGFW
KLMRRNAGAA AEELSASLVR QLYLRKVHKY CDRIRLQDLA PYRAGVRAQA VGADGRMIDD
FVFVRTRHAL HVCNAPSPAA TSALPIAEHI VDQLLA