Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2369 |
Symbol | |
ID | 5083862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2413843 |
End bp | 2415663 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483932 |
Product | GTP-binding protein TypA |
Protein accession | YP_001168563 |
Protein GI | 146278404 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.58563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.543086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTTC GCAACATCGC CATCATCGCG CACGTCGACC ATGGCAAGAC GACCCTCGTG GACGAGCTCC TCAAGCAGTC CGGCGCCTTC CGCGACAACC AGGCCGTGGC CGAGCGCGCG ATGGACAGCA ACGACATCGA ACGCGAGCGC GGGATCACCA TCCTGGCGAA ATGCACCTCG CTCGAATGGT CGGGCAAGCG CATCAACATC GTCGATACCC CCGGTCACGC CGATTTCGGC GGCGAGGTCG AGCGCATCCT GAACATGGTG GACGGCGTGG TGCTGCTGGT CGATGCGGCC GAAGGGCCGA TGCCGCAGAC CAAGTTCGTG ACCTCGAAGG CGCTGGCGCT GGGGCTGCGG CCGATCGTGG TGCTGAACAA GGTGGACAAG CCCGACGCCG AGCCCGACCG CGCGCTGAAC GAGGTCTTCG ACCTCTTCGC CAACCTCGGC GCGGATGACG ATCAGCTCGA TTTTCCCGTG CTTTACGCCT CGGGCCGCTC GGGCTGGGCC GATGAGCAGC TCGACGGGCC GCGCAAGGAT CTGTCGGCCC TTTACGAGCT GGTGCTGCGC CATGTGCCGG CGCCGAAACA GCTCGCCGCC CGCGACGAGC CTTTCCGCAT GCTGGCCACC ACGCTCTCGG CCGACCCGTT CATCGGCCGT ATCCTGACCG GGCGGGTCGA GGCCGGCACG GTCAAGGCCG GCGACACGCT CAAGGCGCTC TCGCGCACCG GCGACCGGAT CGAGCAGTTC CGGGTGTCGA AGGTGCTGGC CTTCCGCGGC CTTTCGCAGA CCCCGATCGA GGTTGGCGAG GCGGGCGACA TCGTGACCCT GGCCGGCATG TCGAAGGCGA CCGTGGCCGA CACGCTCTGC GCACCCGAGG TCGATGTGCC CCTGCCGGCG CAGCCGATCG ACCCGCCCAC CATCTCGGTG ACCTTCGGGA TCAACGATTC GCCGCTCGCC GGCAAGGACG GCAACAAGGT CCAGTCGCGC GTGATCCGCG AGCGGCTGAT GAAGGAGGCC GAGATCAACG TCGCGATCAA GGTCACCGAC ACGCCCGGCG GCGAGGCCTT CGAGGTCGCG GGCCGGGGCG AGCTGCAGAT GGGCGTGCTG ATCGAGAACA TGCGCCGTGA GGGCTTCGAA CTCTCCATCT CGCGTCCGCG CGTGCTCTTC CGGGAAGAGA ACGGCCAGCG GATGGAGCCG ATCGAGGAGG TGACCATCGA CGTGGACGAC GAGTTCACCG GCGCGGTGAT CGAAAAGCTG ACCGGGCCGC GCAAGGGCGA GCTGGTCGAG ATGAAGCCCG CGGGCGCCGG CAAGACCCGG ATCATTGCCC ATGTCCCCTC GCGCGGGCTG ATCGGCTACC ACGGCCAGTT CCTGACCGAT ACCCGCGGCA CCGGCGTGCT GAACCGCGTC TTCCACGAAT GGGCGCCCCA CAAGGGCCCG ATCGAGGGCC GCCGCGTGGG CGTGCTCGTC TCGATGGAAA ACGGAAGCTC GGTCCCTTAT GCGCTCTGGA ACCTCGAGGA GCGGGGCCAT CTCTTCATCG GCGCGCAGGA AGCCGTCTAT GTCGGCATGA TCATCGGCGA GCACTCGCGC GAGAACGATC TCGAGGTGAA CCCGCTGAAG GGCAAGAAGC TCACCAACGT CCGCGCCTCG GGCACGGACG AGGCCGTGCG CCTCACGCCC CCGGTCCGGC TCTCGCTCGA GCAGGCGATC GCCTACATCG ATGATGACGA GCTGGTGGAG GTGACCCCCA AGATCGTGCG TATGCGCAAG CGCCATCTTG ATCCGCATGA GCGCAAGCGC GCCGCGAAGG CCGCCGAGTG A
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Protein sequence | MELRNIAIIA HVDHGKTTLV DELLKQSGAF RDNQAVAERA MDSNDIERER GITILAKCTS LEWSGKRINI VDTPGHADFG GEVERILNMV DGVVLLVDAA EGPMPQTKFV TSKALALGLR PIVVLNKVDK PDAEPDRALN EVFDLFANLG ADDDQLDFPV LYASGRSGWA DEQLDGPRKD LSALYELVLR HVPAPKQLAA RDEPFRMLAT TLSADPFIGR ILTGRVEAGT VKAGDTLKAL SRTGDRIEQF RVSKVLAFRG LSQTPIEVGE AGDIVTLAGM SKATVADTLC APEVDVPLPA QPIDPPTISV TFGINDSPLA GKDGNKVQSR VIRERLMKEA EINVAIKVTD TPGGEAFEVA GRGELQMGVL IENMRREGFE LSISRPRVLF REENGQRMEP IEEVTIDVDD EFTGAVIEKL TGPRKGELVE MKPAGAGKTR IIAHVPSRGL IGYHGQFLTD TRGTGVLNRV FHEWAPHKGP IEGRRVGVLV SMENGSSVPY ALWNLEERGH LFIGAQEAVY VGMIIGEHSR ENDLEVNPLK GKKLTNVRAS GTDEAVRLTP PVRLSLEQAI AYIDDDELVE VTPKIVRMRK RHLDPHERKR AAKAAE
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