| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2296 |
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| Symbol | |
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| ID | 5083715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2333474 |
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| End bp | 2335675 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483859 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001168490 |
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| Protein GI | 146278331 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0498379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TCACGAGCAA GACCGACGCC GACGGCGTCT GCACCATCAC CTGGGACGTG
CCGGGCAAGT CGATGAACGT CATGTCGATG GACGGCTTTG CCGAACTCGA CGGGCTGATC
GCCGCGGCCC TCGCCGATCC GGGCGTGAAG GGAGTGATCC TCACCTCGGG CAAGAAGGAC
TTTGCCGGGG GGATGGATCT CAACGTCATC GCCCGCATGA AGGCCGAAGG CGGCGACGAT
CCGGCCAGGG CTGTGTTCGA AGGCGTGATG CAGATGCACG CCGTCCTGCG CCGGATCGAG
CGCGCGGGCA TGGATCCCAA GACCCACAAG GGCGGCAAGC CCATCGTGGC GGCGCTGCCC
GGCACCGCGC TCGGCATCGG GCTCGAACTG CCGCTGGCCT GCCACCGCAT CATCGCCGCC
GACAATCCGA AGGCGAAGAT CGGCCTGCCC GAGATCATGG TGGGGATCTT CCCCGGCGGC
GGGGGCACGA CACGACTTGT CCGCAAGCTG GGCGCCATGA TGGCCGCGCC GCTGCTGCTC
GAGGGCAAGC TGAACGATCC CAGGGGCGCG AAGGCCGTGG GCGTGGTGGA TGAGGTGGTG
CCCGCGGACG AGCTTCTCGC GCGGGCGAAG GAATGGGTGC TGTCGGCAAC GGACGCCGAC
CTCGTGAAGC CCTGGGAGGC CAGGGGCTAC AAGATGCCCG GTGGCACGCC CTACCATCCC
GGCGGCTTCA TGACCTTCGT GGGCGCCTCG GCCATGGTGA TGGGCAAGAC CATGGGCGTC
TATCCGGCGG CGAAGGCGCT GCTGTCGGCG GTCTATGAGG GTGCCCTGGT GCCCTTCGAC
ACGGCGCTGA AGATCGAGGC CCGCTGGTTC ACCCATGTGC TGATGAACCC CTCCTCCTCG
GCGATGATCC GGTCGCTCTT CATCAACAAG GAGGCGCTGG AGAAGGGCGC CGTCCGCCCT
GCCCTGCCCG ACCAGTCGGT GAGGAAGCTG GGCGTGATCG GCGCGGGCAT GATGGGCGCG
GGCATCGCCC ATGTCGCGGC CAGCGCCGGC ATCGAGGTGG TGCTGATCGA CTCGACGCAG
GAGGCCGCCG ACCGCGGGCG GGCGCATTCG GAAGGGGTGC TCGACAAGGG GATGAAGCGG
GGCAAGATCA CGGCCGGGAA GAAGGCCGAG GTGCTGGCCC GCATTCATGC GACGACCGAC
TACGGAACGC TCGCGGGCTG CGACCTGATC GTCGAGGCGG TGTTCGAGGA TCCGTCGGTG
AAGGCCGAGG TCACGCAGAA GGTCGAGGCA GTGGTGGGGC CGGAGTGCAT CTTCGCCACC
AACACCTCGA CCCTGCCGAT CTCGGGACTC GCCAAGGCCA GCCGCGATCC GGCGCAGTTC
ATCGGCATCC ATTTCTTCTC GCCGGTGGAC AAGATGCTGC TGGTCGAGAT CATCCGCGGC
AAGCAGACTG GCGACCGGGC CGTGGCCAAG GCGCTCGACT TCGTGCGCCA GATCCGCAAG
ACGCCGATCG TGGTGAACGA CGCCCGCTTC TTCTACGCCA ACCGCTGCAT CATCCCCTAT
CTCAACGAGG GGATCCGCAT GGTGGCCGAG GGCGTGCAGC CGGCCCTCAT CGAGAATGCG
GCGCGGCTCG TGGGGATGCC GCTCGGACCG CTGCAACTGG TGGACGAGAC CTCGATCGAC
CTCGGCGTGA AGATCGCCAA GGCCACGCGC GCCGCGATGG GCGATGCCTA CCCGGATTCG
GCGGTGGACG AGGTGATCTT CCGGCTGGCC GACGAGGGCC GCATGGGGCG CAAGGCAAAG
GCGGGCTTCT ACGCCTATGA CGAGGCGGGC AAGCGGCAGG GTCTCTGGAG CGGGCTCGCA
GACCGCTGGC CGGTCGCGCC ACTGCAGCCC GAGCTGACCG AGGTGCAGCA TCGCCTCCTG
TTTGCGCAGG TGCTCGAAGC GGTGCGTGCG CTCGAACAGG GCGTGCTCAC CGACATCCGC
GAGGGGGATG TGGGGGCGAT CCTCGGCTGG GGCTTTGCGC CCTGGTCGGG CGGCCCCTTC
AGCTGGCTCG ACATGATCGG CGCGGCGCGG GCGGTCGAGC TGTGCGAGGA CCTTGCAGGC
CGGCACGGCG CACGCTTTGC ACCCCCGCAA CTGCTGGTCG AGATGGCCCG GCAGGGCGAG
AGCTTCTACG GCCGGTTCGC GCCCCGCGCC CGCGCGGCCT GA
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| Protein sequence | MTDFTSKTDA DGVCTITWDV PGKSMNVMSM DGFAELDGLI AAALADPGVK GVILTSGKKD
FAGGMDLNVI ARMKAEGGDD PARAVFEGVM QMHAVLRRIE RAGMDPKTHK GGKPIVAALP
GTALGIGLEL PLACHRIIAA DNPKAKIGLP EIMVGIFPGG GGTTRLVRKL GAMMAAPLLL
EGKLNDPRGA KAVGVVDEVV PADELLARAK EWVLSATDAD LVKPWEARGY KMPGGTPYHP
GGFMTFVGAS AMVMGKTMGV YPAAKALLSA VYEGALVPFD TALKIEARWF THVLMNPSSS
AMIRSLFINK EALEKGAVRP ALPDQSVRKL GVIGAGMMGA GIAHVAASAG IEVVLIDSTQ
EAADRGRAHS EGVLDKGMKR GKITAGKKAE VLARIHATTD YGTLAGCDLI VEAVFEDPSV
KAEVTQKVEA VVGPECIFAT NTSTLPISGL AKASRDPAQF IGIHFFSPVD KMLLVEIIRG
KQTGDRAVAK ALDFVRQIRK TPIVVNDARF FYANRCIIPY LNEGIRMVAE GVQPALIENA
ARLVGMPLGP LQLVDETSID LGVKIAKATR AAMGDAYPDS AVDEVIFRLA DEGRMGRKAK
AGFYAYDEAG KRQGLWSGLA DRWPVAPLQP ELTEVQHRLL FAQVLEAVRA LEQGVLTDIR
EGDVGAILGW GFAPWSGGPF SWLDMIGAAR AVELCEDLAG RHGARFAPPQ LLVEMARQGE
SFYGRFAPRA RAA
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