| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2272 |
|---|
| Symbol | |
|---|
| ID | 5083692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2312784 |
|---|
| End bp | 2314088 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640483836 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_001168467 |
|---|
| Protein GI | 146278308 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.147267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGC GCTATTCCCG CCCCGACATG GTGGCCATCT GGTCGCCCGA GACGAAGTTC
CGCATCTGGT TCGAGATCGA GGCCCACGCC TGCGACGCGC AGGCCGCCCT TGGCGTGATC
CCGAAGGCCA ATGCCGAAGC CGTCTGGAAG GCCGCCGACG CCACCTTCGA CGTCGCCCGC
ATCGACGAGA TCGAGGCGGT GACCAAGCAT GACGTGATCG CCTTCCTCAC CCACCTCGCC
GAGATCGTGG GCGCCGACGA GGCGCGCTTC GTCCATCAGG GCATGACCTC GTCGGACGTG
CTCGACACCA CGCTGAACAT CCAGCTCGTG CGCGCGGCCG ACCTGCTGCT GGCCGGCCTC
GACCGGGTGC TTGCGGCCCT GAAGACCCGT GCCTACGAGC ATAAGGACAC GGTCCGCATC
GGGCGCAGCC ACGGCATTCA TGCCGAGCCG ACGACGATGG GCCTGACCTT CGCGCGCTTC
TACGCCGAGA TGGCGAGGAA CCGCACGCGC CTCGTCAATG CGCGCGCCGA GGTCGCCACC
GGCGCGATCT CGGGCGCCGT CGGCACCTTC GCCAACATCG ACCCCCGCGT CGAGGAGCAT
GTCTGCGAGA AGCTGGGCCT CCTCCCCGAG CCGATCTCGA CCCAGGTGAT CCCGCGCGAC
CGGCACGCCA TGTTCTTCGC CACGCTGGGG GTCATCGCCT CGTCGATCGA AAACGTCGCG
ATCGAGATCC GGCACATGCA GCGCACCGAG GTGCTGGAAG CGGAAGAGTT CTTCTCCCCC
GGCCAGAAGG GCTCGTCGGC GATGCCGCAC AAGCGCAACC CGGTGCTGAC CGAGAACCTG
ACCGGCCTTG CGCGGCTGGT GCGGATGGCC GTCATCCCGG CGATGGAGAA TGTGGCGCTC
TGGCACGAAC GCGACATCTC GCATTCCTCG GTGGAGCGCG CCATCGGCCC CGACGCCACG
ATCACGCTGG ATTTCGCGCT GCACCGGCTG GCCGGCGTGG TGGAAAAGCT CGTGGTCTAC
CCCGAGAACA TGCTGAAGAA CATGAACAAG TTCCGCGGCC TCGTGATGAG CCAGCGCGTG
CTGCTGGCCC TGACGCAGGC CGGCGTGAGC CGCGAGGACA GCTATCGCCT CGTGCAGCGC
AACGCGATGA AGGTCTGGGA AGAGGGCAAG GACTTCAAGG AGGAGCTGCT GGCCGATCCC
GAAGTGACGG CCGCGCTGAG CCCGGCCGAG ATTGAGGAGA AGTTCGACCT CGGCTACCAT
CTCAAGCACG TCGATACGAT CTTCGCCCGC GTCTTCGGAG CCTGA
|
|---|
| Protein sequence | MIPRYSRPDM VAIWSPETKF RIWFEIEAHA CDAQAALGVI PKANAEAVWK AADATFDVAR
IDEIEAVTKH DVIAFLTHLA EIVGADEARF VHQGMTSSDV LDTTLNIQLV RAADLLLAGL
DRVLAALKTR AYEHKDTVRI GRSHGIHAEP TTMGLTFARF YAEMARNRTR LVNARAEVAT
GAISGAVGTF ANIDPRVEEH VCEKLGLLPE PISTQVIPRD RHAMFFATLG VIASSIENVA
IEIRHMQRTE VLEAEEFFSP GQKGSSAMPH KRNPVLTENL TGLARLVRMA VIPAMENVAL
WHERDISHSS VERAIGPDAT ITLDFALHRL AGVVEKLVVY PENMLKNMNK FRGLVMSQRV
LLALTQAGVS REDSYRLVQR NAMKVWEEGK DFKEELLADP EVTAALSPAE IEEKFDLGYH
LKHVDTIFAR VFGA
|
|---|
| |