Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2220 |
Symbol | |
ID | 5084124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2254505 |
End bp | 2255581 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483783 |
Product | inner-membrane translocator |
Protein accession | YP_001168415 |
Protein GI | 146278256 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.120044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.964416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTACC GTGAAGCGGG CGAATTCAAG ACAAGCTACG CCCAGGACAG CCAGACCTTC CCGATCTGGT GGGACCGGCT CTGGTATCAG GTGGCACTTG TAGTGGGCTT CCTCGTCCTG CCGTTCTTCA TGACCGACTA CTGGGCCAAC GCGGTCTTCG TGCCCTTCCT GATCTATGCG ATCGCGGCGA TCGGGCTGAA CATCCTGACC GGCTATTGCG GGCAGGTCAG CCTCGGCACC GGCGGCTTCA TGGCGGTGGG GGCCTATGCG GTCTACAAGC TGATGACCTC CTTCCCCGAG GTCTCGATCG TGATCCACGT CATCCTCGCC GGCGGGATCA CCGCGGCCGT GGGCGTGCTC TTCGGCCTGC CCTCGCTCAG GATCAAGGGC TTCTACCTGG CCGTGGCGAC GCTGGCCGCG CAGTTCTTCC TTGTCTGGCT CTTCAACAAG GTGCCGTGGT TCTACAACTA CTCGGCCTCG GGCCAGATCA CCGCGCCCGA ACGCACGCTC TTCGGCATCG CCGTCACCGG GGCCAACACG CCGGCCTGGG CCAAGTATCT CTTCTGCGCG GTCTTCCTCT TCGCCCTCGC CTGGATCGCC CGCAACCTGA CGCGCGGCAC CATCGGGCGC AAGTGGATGG CGATCCGTGA CATGGACATC GCGGCCGAGA TCATCGGGGT GAACCCGCTG GCCGCGAAAC TGTCGGCCTT TGCCGTCTCG TCCTTCTTCA TCGGCATCGC GGGGGCGCTG TTCTTCGCGG TCTATCTGGG CGCGGCCGAG GTGGGCGAGG CCTTCGGCAT CCAGAAGTCG TTCCTGATCC TCTTCATGAT CATCATCGGG GGCCTCGGCA GCATCTTCGG CAGCTTCGCC GGCGCGGCCT TCCTCGTCCT GCTGCCGGTG TTCCTGAAGA ACGTGCTGGT GGGTGGCCTT GGCTGGCCCT CGGATCTCGC GGCCCACATT GAGCTGATGA TCCTGGGCGG CCTCATCATC GGCTTCCTCA TCCTCGAACC GCACGGGCTG GCCCAGCTCT GGCGCGTGCT GAAGGAGAAA CTGCGACTGT GGCCCTTCCC GCACTGA
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Protein sequence | MLYREAGEFK TSYAQDSQTF PIWWDRLWYQ VALVVGFLVL PFFMTDYWAN AVFVPFLIYA IAAIGLNILT GYCGQVSLGT GGFMAVGAYA VYKLMTSFPE VSIVIHVILA GGITAAVGVL FGLPSLRIKG FYLAVATLAA QFFLVWLFNK VPWFYNYSAS GQITAPERTL FGIAVTGANT PAWAKYLFCA VFLFALAWIA RNLTRGTIGR KWMAIRDMDI AAEIIGVNPL AAKLSAFAVS SFFIGIAGAL FFAVYLGAAE VGEAFGIQKS FLILFMIIIG GLGSIFGSFA GAAFLVLLPV FLKNVLVGGL GWPSDLAAHI ELMILGGLII GFLILEPHGL AQLWRVLKEK LRLWPFPH
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