Gene Rsph17025_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2219 
Symbol 
ID5084123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2253512 
End bp2254501 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID640483782 
Productinner-membrane translocator 
Protein accessionYP_001168414 
Protein GI146278255 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.515204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTG ACCAGCTTCT CTTCGCGATG GAGGTCACGC TGAACGGCCT GATGGCGGGC 
GTGATGTATG CGCTCGTGGC CCTGGGCTTC GTGCTGATCT TCAAGGCCTC GGGCATCTTC
AACTATGCGC AGGGGGTGCT GGCGCTGTTT GCCGCCCTGA CGCTGGTGGG CCTCCAGAAC
GGGCAGATCC CCTTTGCCCA TCTCATCAAC GCGACCTTCG GCACCAAGCT GCACCATTTC
GGCTGGACGC TGCCGAGCGT GGTGGCCATC GCGCTCACCG CGCTGGTGAT GGTCGGCCTC
GCCTATCTGA TCGAGCGGCT GGTGCTGAAG CATCTGGTCA ACCAGGAGCC GATCATCCTC
TTCATGGCCA CTATCGGGCT GGCCTACTTC CTCGAAGGCC TGGGCGACGT GATGTGGGGC
GCCGACATCA AGAAGCTGGA CGTGGGCCTG CCGCAGGGCA TCTCGGAAAG CATCGAAAGC
GTCACCGACG CCTGGTTCGG CTATGGCTTC TTCATCGACA AGCTCGATGT GGTGGCCGCC
CTCGTCGCGG CGGCGCTGGT GGCGGCGCTG ACGCTCTTCT CGCAATACAC CAAATATGGC
CGGGCCTTGC GCGCGGTGGC CGACGACCAT CAGGCGGCGC TCTCGGTCGG CATCTCGCTG
CGCTTCGTCT GGGTGCTGGT CTGGTCGATC GCGGGGTTCG TGGCGCTGAT CGCGGGCATC
ATGTGGGGCA CCAAGTCGGG CGTGCAGTTC TCGCTGAGCC TGATCGCGCT GAAAGCGCTG
CCGGTGCTGA TGCTGGGCGG CTTCACCTCG ATCCCCGGCG CCATCGTCGG CGGGCTGATC
ATCGGCATGG GCGAGAAGCT GTTCGAGTTC TTTGCGGGCC CGCTGATCGG CGGCGCGACC
GAGAACTGGT TCGCCTACGT GCTCGCGCTC CTGTTCCTCG TCTTCCGGCC GCAGGGCCTG
TTCGGCGAAC GCATCATCGA GAGGGTCTGA
 
Protein sequence
MLPDQLLFAM EVTLNGLMAG VMYALVALGF VLIFKASGIF NYAQGVLALF AALTLVGLQN 
GQIPFAHLIN ATFGTKLHHF GWTLPSVVAI ALTALVMVGL AYLIERLVLK HLVNQEPIIL
FMATIGLAYF LEGLGDVMWG ADIKKLDVGL PQGISESIES VTDAWFGYGF FIDKLDVVAA
LVAAALVAAL TLFSQYTKYG RALRAVADDH QAALSVGISL RFVWVLVWSI AGFVALIAGI
MWGTKSGVQF SLSLIALKAL PVLMLGGFTS IPGAIVGGLI IGMGEKLFEF FAGPLIGGAT
ENWFAYVLAL LFLVFRPQGL FGERIIERV