| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2184 |
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| Symbol | |
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| ID | 5084199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2215152 |
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| End bp | 2217650 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483747 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001168379 |
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| Protein GI | 146278220 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.425647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA TGCCCAATCT GCGCAGCAGG CTGACGGGCC AGCCCCAGGG CCCGGCCGAG
GAATGCTGGG TGGCGCTGTT CGACGGCGTG GCGCATCCCG TCCTGATCAA GAACTCCGAG
TCGCGCGTGA TCTTCATGAA CAGCGCGGCC TGCGAGCTGC TCGGATGCCA GCGGGGGGAG
CTTGAAGGGC GCGCCGAGCA TGAGCTTGTC GGCGGGCTGA CCGCGGCCTG GCTGCACGAT
CTCGACGCCG AGGCGATGCT CAGCGGCTCG CTCACCGTCG AGCAGGTGGT GCCGGGGCCC
GCCGGCCTGC GCCGCTTTCT CGTGTCGCGC AAACCGGCCG GAGAGCATCT TGTCGTCACC
TTCTTCGAGA TCACGGAGCT TCGCCGGACG GAAGAGGCCC TGCGCGAGCG CGAGGCGCAT
CTGCGCGGCC TTCTCGATCT CAATCCTCTG GTTCCCTTCA GCATCTCCCC GGACGGGACG
CTCTCGGACA TCTCGGATCG CCTGGTGGAT CTGACCGGCC TGCCGCGCGA CACGTCTCAT
GTCGATGACT GGTGGGCGGC CATGCATCCC GACGACCGGC CCGAGCTTCG GGCCGCCTGG
GCGCAGGCCG TGCGGGACGG GGGCTCGTTC GACGCCGAGC ACAGGCTCCG CATGCCGGAC
GGCCAGTATC GCTGGTTCCG GGCGCGCGTC GTGGCGCGGC GCGATGAGGA GGGGCGGATC
GACCGCTGGT TCGGCATCCT CGAGGATGTG CATGAGCGCC ACCTCTCGCT CGACCATCTG
CGCGAGAGCG AGGCGCGCTT TCGCGCCTTC GCCGACGATG CGCCGGTCAT GATCTGGGTG
ACGGATGTGG AGGGGCACAA TGTCTTCGTG AGCCGGAGCT GGCTGAAGGT CACGGGGCAG
TCGCCCGAGG AGGCGGTCAA CGAGGGCTGG GCCGCGGTCA TCCATCCCGA GGATCGCGAC
GCCGTGGTCG CGATCTGGGA GAGCGCCCTG CGCCGCCGAG TGCCCTTCAC GAACGAATTC
CGGGTGCGCC GGCAGGATGG CAGCTGGTGC TGGGTGATCG ACGTGGGGCA GCCGCGCGTT
CTCGCGGACG GCACCTTCAT CGGCTACATC GGCTGCTGCG TGGACATCAG CGCCCGCCGC
CAGGCCGAGG ATGACCGGGT GATGGCGCAG CTGCAGGTCT TCCACATGGC GCGCCACGAC
ATGCTGACCG GCCTGCCCAA CCGGCACTAT TTCGGCGACT GCTACGAGGA GGCCGTGGCG
GCTCTTGCGG GCGGCCGCTC GGTGGCGGTT CACATGCTGG ACCTCGACGG GTTCAAGGCG
GTGAACGACA CGCGCGGGCA TCCGGTGGGC GATCAGGTTC TGCGGCAGGT CGCCGACCGG
CTGCGCACCT CGGTGCGCAG CACCGACACG GTGGCCCGAC TGGGCGGCGA CGAATTCGCC
GTGATCCAGA CGCCGGTCCG GACCGAGCAG GAGGCCTGCG ATCTGGCCCG CCGCCTGATC
GCGGCCGTCT CGAAGCCGTT CAACATCGAC GGCACCGTGC CCGAGGTGGG GGCGAGCGTC
GGCATCGCGT TTGCGCGCGG CCGCGGCGAC AGCGCCGAAG AGGTCATGCG CTTCGCCGAC
GTGGCGCTCT ATGCCGCCAA GCAGGCCGGC CGGGGCACCT TCCGCGTCTT TGACGAAGCG
ACCGACATCC ATCTCCAGAG CCGGCAGAAG ATGAAGTCCG CGCTGCGGGC GGCCCTGGGG
CAGGGCGAGC TGTCGGTGTT CTACCAGCCG CTGATCGGGC TGGCCGACGG GCGCGTCACC
GCCTGCGAGG CGCTGATGCG CTGGCACCGC AAGGGGGCGG GCTGGATCAC GCCCGACCAG
TTCATTCCCG TGGCCGAAGA GGCGGGCCTG ATCGGCGTGA TGGGCGAGTG GGTCCTGCAT
GAAGCCTGCG CCCATGCCGC CCGCTGGCCC GACAACGTGT CGCTCGCCGT GAACCTCTCG
CCGCTCCAGT TCCACGGCGG CGGGCTCGTG GATGTGGTCG TGTCGGCCCT GCGCGCCTCG
GGCCTTCCGC CCGAGCGGCT GCAACTCGAG ATCACCGAGT CGGTGCTGCT CGACCCGACC
GACCGCAACA TCACGGTGCT GCAGGAACTG CGCGCGGTGG GTGTGAAGAT CGTGATGGAC
GATTTCGGCA CCGGCTATTC GTCGCTGGGC TACCTGCGCA GCTTTCCGTT CGACAAGATC
AAGGTGGATC GGTCCTTCAT CCGCGATCTT CCTCATGCGC GCGAGGCGCT GGCGATACTC
AAGGCGGTGG CGGGCCTCGG CCGCAGCCTC GACATGCGCA CCACCGTCGA GGGGGTCGAG
ACCCAGGCCC AGCTCGATTG CGCCATCGCC GAAGGGGTGG ACGAGGCGCA GGGCTTCTTC
TTCTCCCGCC CGCTGCCGGC GCCCGCGATC ACCAGCTTCA TCTCCGGCCG TCTGGGCCGC
AGGTTTGCGG CCTCGAAAGG CTCGGAAGGG GCGGCCTGA
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| Protein sequence | MTEMPNLRSR LTGQPQGPAE ECWVALFDGV AHPVLIKNSE SRVIFMNSAA CELLGCQRGE
LEGRAEHELV GGLTAAWLHD LDAEAMLSGS LTVEQVVPGP AGLRRFLVSR KPAGEHLVVT
FFEITELRRT EEALREREAH LRGLLDLNPL VPFSISPDGT LSDISDRLVD LTGLPRDTSH
VDDWWAAMHP DDRPELRAAW AQAVRDGGSF DAEHRLRMPD GQYRWFRARV VARRDEEGRI
DRWFGILEDV HERHLSLDHL RESEARFRAF ADDAPVMIWV TDVEGHNVFV SRSWLKVTGQ
SPEEAVNEGW AAVIHPEDRD AVVAIWESAL RRRVPFTNEF RVRRQDGSWC WVIDVGQPRV
LADGTFIGYI GCCVDISARR QAEDDRVMAQ LQVFHMARHD MLTGLPNRHY FGDCYEEAVA
ALAGGRSVAV HMLDLDGFKA VNDTRGHPVG DQVLRQVADR LRTSVRSTDT VARLGGDEFA
VIQTPVRTEQ EACDLARRLI AAVSKPFNID GTVPEVGASV GIAFARGRGD SAEEVMRFAD
VALYAAKQAG RGTFRVFDEA TDIHLQSRQK MKSALRAALG QGELSVFYQP LIGLADGRVT
ACEALMRWHR KGAGWITPDQ FIPVAEEAGL IGVMGEWVLH EACAHAARWP DNVSLAVNLS
PLQFHGGGLV DVVVSALRAS GLPPERLQLE ITESVLLDPT DRNITVLQEL RAVGVKIVMD
DFGTGYSSLG YLRSFPFDKI KVDRSFIRDL PHAREALAIL KAVAGLGRSL DMRTTVEGVE
TQAQLDCAIA EGVDEAQGFF FSRPLPAPAI TSFISGRLGR RFAASKGSEG AA
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