Gene Rsph17025_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2149 
Symbol 
ID5082927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2178554 
End bp2179738 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content69% 
IMG OID640483712 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_001168344 
Protein GI146278185 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCC TGTCGATCTT CGGGGCCACC GGCTCCATCG GCGAATCCAC CTTCGATCTC 
GTCATGCGGA AAGGGGGCCC GGAGGCCTTC CGAACCGTGG CCCTGACCGG GGGCCGCAAC
GTGGCGCGAC TGGCCGAGAT GGCGCGCGCG CTGAAGGCGG AGCTGGCCGT CACCGCGCAT
GAAGAGTGCC TGCCCGCGCT GCGCGAGGCG CTGGCGGGAT CGGGGACCGA GGTCGCGGGC
GGAACGCAGG CCATCGCCGA GGCGGCCGAC CGGCCGGCCG ACTGGACGAT GTCGGCGATC
GTGGGGGCCG CGGGCCTCGT GCCGGGGATG CGGGCGCTGA AGCACGGCCG GACGCTGGCC
TTGGCGAACA AGGAAAGCCT TGTCACCGCG GGCCAGCTTC TGATGCGCAC CGCCGAGGAG
AACGGCGCCA CCATCCTGCC GGTGGACAGC GAACATTCGG CCGTCTTCCA GGCGCTCGCG
GGTGAGGACA CGACCTGCGT CGAGCGGGTG ATCATCACCG CGTCGGGCGG GCCGTTCCGC
GACTGGACGC TCGAGCAGAT CCGGGGCTGC ACCGTGGCGC AGGCGATGGC GCATCCGAAC
TGGTCGATGG GCCAGCGGAT CTCGATCGAC AGCGCCTCGA TGTTCAACAA GGCGCTGGAG
CTGATCGAGA CGCGCGAGTT CTTCGGCTTC GAGCCGGAGC GGATCGAGGC CGTCGTGCAT
CCGCAGAGCA TCGTCCACGC GCTCGTGGGC TTCTGCGACG GCGGGATCAT GGCGCATCTG
GGGCCGGCCG ACATGCGCCA CGCCATCGGC TTTGCGCTGA ACTGGCCGGG CCGCGGCGAG
GTGCCGGTGG CGCGTCTCGA CCTCGCACAG ATTGCGAACC TCACCTTCCA GAAGCCTGAC
GAAGAACGCT TTCCGGCCCT GCGCCTCGCA CGCGAGGTGA TGGCGGCGCG CGGTCTTTCG
GGGGCGGCCT TCAACGCGGC CAAGGAGATT GCCCTCGACC ATTTCATCGC GGGCAACATC
GGCTTTCTCG ACATGGCGGC GGTCGTCGAA GAGGCGCTTT CGGCGGTTTC TGCCGATCCG
CTCTTCGGAA AAGTGCCCTC GACCCTTGAG GAAGTGCTGG CAATGGACCA TCTCGCTCGG
AAGGCGGCAG AAGAAGCCGC CAGCTTCCGC CAGCAGAAAA GGTAA
 
Protein sequence
MRSLSIFGAT GSIGESTFDL VMRKGGPEAF RTVALTGGRN VARLAEMARA LKAELAVTAH 
EECLPALREA LAGSGTEVAG GTQAIAEAAD RPADWTMSAI VGAAGLVPGM RALKHGRTLA
LANKESLVTA GQLLMRTAEE NGATILPVDS EHSAVFQALA GEDTTCVERV IITASGGPFR
DWTLEQIRGC TVAQAMAHPN WSMGQRISID SASMFNKALE LIETREFFGF EPERIEAVVH
PQSIVHALVG FCDGGIMAHL GPADMRHAIG FALNWPGRGE VPVARLDLAQ IANLTFQKPD
EERFPALRLA REVMAARGLS GAAFNAAKEI ALDHFIAGNI GFLDMAAVVE EALSAVSADP
LFGKVPSTLE EVLAMDHLAR KAAEEAASFR QQKR