Gene Rsph17025_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2054 
Symbol 
ID5082759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2097122 
End bp2098072 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content72% 
IMG OID640483616 
Productacetamidase/formamidase 
Protein accessionYP_001168250 
Protein GI146278091 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.23832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.254507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCACC ACCTTCCCGC CTCGCCCGCC ACCGTCCACT GGGGACATCT CGATCCCGCA 
GCCGAGCCCG TCCTGCGCCT GCGCCCCGGC GAGCGGGCGG TGATCGAGAC GCTCTCGGGC
GGGCCGCGCA ACCTGCCGCC CGAGGGCCAC CCCTGCCGGG TGCTCGACAG CCACCGCGCC
GTGATGGCCG CGCAGCAGCC CCATCTCGGG CCGCACATGC TGACCGGGCC CGTCCATGTC
GAGGGAGCCG AGCCCGGCGA CCGTCTGATC GTCGAGATCG AGGAGATCGA GCTTGCGCAG
GACTGGGGCT GGAGCGCGAT CGAGCCGGGC TTCGGGATCT TTCCCGATCT TGCGACCCGC
TACGAGAGCC TCGTCGTGCC GATCGACCGC GCCACGGGCA GCGCGCGGCT GCCCTGGGGG
CCGATGGCGG CGCTGGCGCC CTTCTTCGGC ATCCTCGCCG TGGCCCCGCC GCCCGAGGGC
GGCCGCGTGA GTTCGGTTCC GCCCGGCCCC TTCGGCGGCA ATGTGGACAA CCGCTTCTTC
CGCAAGGGTG CCCGGATCGC CTTTCCGGTC TTCTGCCCCG GCGCCCTCTT CTTCGCGGGC
GACGGCCACG CGCTGCAGGG CGACGGTGAG GTCTGCGACA CGGCGCTCGA GACCGCGCTG
AACGGACGTT TCCGCTTTGC GCTGGAGAAG GGCACCGCCC CTTCGGCGCC CGAGGTCGAG
ATCGGCGAGT TGATCGTCAC GATGGGCTTT CACGAGACGC TCGACGAGGC GGCGCGCGCG
GCCACGGCAC GGATGCTCGA CTGGATCTGC GCCCGCACCG GCCTTGGCCG CACCGACGCC
TGGCGCCATG CGAGCCTGTT TGCCGACCTG CGCATCACGC AGGTGGTGAA CGGACGGAAG
GGGGTTCATT GCGTGCTGGA CCGGCGCAGC CTGATCGGCG CGCCGGCCTG A
 
Protein sequence
MDHHLPASPA TVHWGHLDPA AEPVLRLRPG ERAVIETLSG GPRNLPPEGH PCRVLDSHRA 
VMAAQQPHLG PHMLTGPVHV EGAEPGDRLI VEIEEIELAQ DWGWSAIEPG FGIFPDLATR
YESLVVPIDR ATGSARLPWG PMAALAPFFG ILAVAPPPEG GRVSSVPPGP FGGNVDNRFF
RKGARIAFPV FCPGALFFAG DGHALQGDGE VCDTALETAL NGRFRFALEK GTAPSAPEVE
IGELIVTMGF HETLDEAARA ATARMLDWIC ARTGLGRTDA WRHASLFADL RITQVVNGRK
GVHCVLDRRS LIGAPA