Gene Rsph17025_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2048 
Symbol 
ID5082753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2091298 
End bp2092365 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content75% 
IMG OID640483610 
Producturea amidolyase related protein 
Protein accessionYP_001168244 
Protein GI146278085 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.984998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.316716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG AGATCCTCAC GGCCGGGCCG ATGCTGACGG TGCAGGACGC CGGCCGCTTC 
GGGCTGCGCC ACATGGGCGT GTCGCCGGCG GGCCCCATCG ACCGCGCCGC CATGGCGCTG
GCCAATGCGC TGGTGGGCAA CGATCCCGGC GCGGCGGCGC TCGAATTTGC CGGGCCCGCG
GGCCGGTTCC GCTGCGACCG GCCGGTGCGC TTTGCCGTCG CGGGCGCCGA CTGCCCCTTG
CGCATCGACG CCCGCACCGT TTCCCCCGGC GAGAGCCACC GGCTGAACCC CGGCGAGACG
CTGACGGTGG GCGTGCCCGA GGGCGCGGTC TGGGCCTATC TCGCCTTCTC GGGCGCCATC
GCCTCGCCCG AGGTGCTCGG CTCGCGCGCG ACCCATCTGC GCAGCGGCGT CGGGGGCCGC
GCGCTCGGCG CGGGCGACCG CCTGCCGCTC GGCGAGGACG ACCCGGAGGC CCCCTGCCTG
CGCCCCGGCC TCCGCCTCGA GGCCGCGGCA CCCTTCCGGG AGACGGGGCC GATCCGGCTG
ATCCTCGGCC CGCAGGACGA TCATTTCGCG CCCGAGGTGA TCGCCCGCCT CACCGGCTGC
GACTTCACCG TCACGCCCCA GCGCGACCGG ATGGCGATGG TGCTGGGCGG TGTCGAACTG
CCGGCCGAGC GGGGGCACGA CATCGTGTCC GACGGCACGG TGCCCGGCTC GGTGCAGGTG
CCCGGCTCGG GGACGCCGCT CGTCCTGCTG GCGGAAAGCC AGACCACCGG CGGCTATCCC
AAGATCGGAA CCGTCGCTTC GGTCGATCTG GCGCGGCTTG CGCAGATGCC GGTGGGCGCG
CGGTTCCGCT TTGCGCTGAT CTCGGCCCGC GAGGGCGAGG ATCTCTGGAT TGCCCGGCAG
GCGCGCCTGC GCCGCCTGCT CGAAGGGCTG GTGGCCCGGC CCGAGGGCCT CTTGCGCAGC
GACTACCTCC TGTCCTGCGA CCTCGTCGGC GGCTTTTACG CGCCGGGCGA AGTGGTGCGC
CCCGTGACGC GGCCCGTGAC GCGGCCCGTG CCGGAGGAGC GCCCATGA
 
Protein sequence
MSLEILTAGP MLTVQDAGRF GLRHMGVSPA GPIDRAAMAL ANALVGNDPG AAALEFAGPA 
GRFRCDRPVR FAVAGADCPL RIDARTVSPG ESHRLNPGET LTVGVPEGAV WAYLAFSGAI
ASPEVLGSRA THLRSGVGGR ALGAGDRLPL GEDDPEAPCL RPGLRLEAAA PFRETGPIRL
ILGPQDDHFA PEVIARLTGC DFTVTPQRDR MAMVLGGVEL PAERGHDIVS DGTVPGSVQV
PGSGTPLVLL AESQTTGGYP KIGTVASVDL ARLAQMPVGA RFRFALISAR EGEDLWIARQ
ARLRRLLEGL VARPEGLLRS DYLLSCDLVG GFYAPGEVVR PVTRPVTRPV PEERP