Gene Rsph17025_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2026 
Symbol 
ID5082640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2069416 
End bp2070798 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content74% 
IMG OID640483588 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001168222 
Protein GI146278063 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.721167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.721714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCT CTCCCGTCCG AAACGGCGAC GTTTCCTTCT GGTTCGCCGA TCTCGGCGGC 
CTTCCCGCGC GGCGCCCGCC CCTGCCCGGA GACACGCGCG CCGATGTCTG CATCGTGGGC
GCGGGCTACA CCGGGCTCTG GGCCGCACTC TATCTGAAGG AGCAGGCGCC CGAGCTTGAC
GTGCTGGTGG TCGAGAAGGA GTTCGCGGGC TTCGGCGCCT CGGGGCGCAA CGGCGGCTGG
CTGACCGGCA GCTTCGCCTG GAACCACGAC CGCTACCTCT CGACCGGAAC GGCCGAGGGC
GTGCGCGCCA TGGTATCCGC CATGAGCGGC ACGGTGGACG AGGTGATCCG CATGGCCGAA
GCGGAGGGAA TCGACGCCGA CATCCATCGG ACCGACGAGC TGATGGTGGC GGTGACGCCC
GCGCAGCGGG CGCGGGCCGA GGCCGAAGTG CGCCACCGCC AGGCTTGGGG CGAGGAACGG
GTGAGCTTCC TCGAGGCCGG TGCGCTCGCG CGGCGTGTCC GCATCCCGAA TGCGGAAGGG
GCGATGGTGG TGGGCGGTGT CGCACGGGTG CAGCCGGCCA AACTCGTGCG CGGGCTGGCC
GCGGCCGCCG AACGGCGCGG CGTGCGGATC GCCGAGGGCA CCGAGGTGCT GGGCATCGCG
CCCGGCCGGG TCGAGACGCG GCAGGGCACG GTGCAGGCGC AAGTCATCCT GCGCGCGACC
GAAGGCTTCA CCGCCACCCT GCCCGGCCTG AAGCGCGAGT GGCTGCCGCT CAACTCGGCG
CAGATCGTGA CCGAGCCGCT GCCGCCCGAG GTCTGGGACC GGATCGGCTG GGAGGGCGCC
GAGATCCTCG GCGACATGGC CAACGCCTAT TGCTACTGCC AGCGCACGCG CGAGGGGCGC
ATCGCGGTCG GCGCCCGCGG GCGGGCCTAT CGCATGGCCT CGCGCATCGA CGCGCGCGGC
GAGGCCGAAG CCGTCACCGT GGCCCACCTC CTCCAGCGTC TGAAGCGGCA TTTCCCGGCC
GCGGCCGGGG CGCGGATCGA CCATGCCTGG GGCGGGGTGC TGGGCGTGCC ACGCGACTGG
TGCGCGACGG TGGGCCTCGA TCCCGCGACG GGGATCGGCT GGGCGGGCGG CTATGTGGGT
GTGGGCGTCT CAACCTCGAA CCTCGCGGGG CGCACGCTGG CCGACCTCGC GCTCGGGCGC
GACACGGCGC TGACGCGGCT GCCGTGGGTC AACCGCCGCG TCCGCCGGTG GGAGCCTGAG
CCGCTGCGCT GGCTGGGCGT GCGGGGGATG TATCGGCTGC TCGAGGCCGC GGACCGGCAG
GAAGAGGCCG GCGGCCCGCC CTCCTGGCTG GCGAGCCTCG GCCACCGGCT GGCGGGGCGC
TGA
 
Protein sequence
MTSSPVRNGD VSFWFADLGG LPARRPPLPG DTRADVCIVG AGYTGLWAAL YLKEQAPELD 
VLVVEKEFAG FGASGRNGGW LTGSFAWNHD RYLSTGTAEG VRAMVSAMSG TVDEVIRMAE
AEGIDADIHR TDELMVAVTP AQRARAEAEV RHRQAWGEER VSFLEAGALA RRVRIPNAEG
AMVVGGVARV QPAKLVRGLA AAAERRGVRI AEGTEVLGIA PGRVETRQGT VQAQVILRAT
EGFTATLPGL KREWLPLNSA QIVTEPLPPE VWDRIGWEGA EILGDMANAY CYCQRTREGR
IAVGARGRAY RMASRIDARG EAEAVTVAHL LQRLKRHFPA AAGARIDHAW GGVLGVPRDW
CATVGLDPAT GIGWAGGYVG VGVSTSNLAG RTLADLALGR DTALTRLPWV NRRVRRWEPE
PLRWLGVRGM YRLLEAADRQ EEAGGPPSWL ASLGHRLAGR