| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1985 |
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| Symbol | |
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| ID | 5082349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2025265 |
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| End bp | 2026050 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640483547 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001168181 |
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| Protein GI | 146278022 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.274604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGG ATCTGGGCAT TCGCGGCCGC CGCGCGCTGG TCTGCGCCTC GTCGAAAGGT
CTGGGGCTGG GCTGCGCGCG GGCGCTGGCC GAGGCTGGGG TCGATCTGGT GATGAACGCC
CGCGGCGCCG AGGCGCTCGA GGCGGCGGCC GAGGATCTGC GCGCCCGCCA CGGCGTCTCC
ATCACCACCG TCGCCGCCGA CATCGTCTCC GACGAGGGCC GGGCGCGGGT GCTGGAGGCC
GCCGGATCGG TGGACATCCT CGTGACCAAC GCCGGGGGGC CGCCGCCCGG CAACTGGGCC
GACTGGACGC GCGACGACTT CATCCGCGCG CTCGACGCCA ACATGCTGAC GCCCATCGCG
CTGATGACGG CGCTTCTGCC CGGCATGATC GACAAGGGCT GGGGTCGGGT GGTCAACATC
ACCTCGCAGT CGGTGCGGGC GCCCATTCCG GCGCTTGGGC TGTCGAACTC GGCGCGGGCG
GGGCTGACGG GCTATGTCGC GGGCACCTCG CGGCAGGTCG CGCAGCACGG CGTCTGCATC
AACAACCTCC TGCCGGGGAT CCACGACACG GACCGGGCCG AGGCGCTCGA TCGCAACGTG
ATGAAGGCCC AGGGCATCAG CTTTGACGAG GCCCGGGCGC AGCGGGCGGC CGCGATCCCG
ACCCGGCGCT ACGGGCAGGC CGAGGATTTC GGCGCGGCCT GCGCCTTCCT CTGCTCGGAG
CAGGCGCGCT TCATCGTGGG GCAGAACCTG CTGGTGGACG GCGGCGGGAC CAACCTGACC
GTCTGA
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| Protein sequence | MTMDLGIRGR RALVCASSKG LGLGCARALA EAGVDLVMNA RGAEALEAAA EDLRARHGVS
ITTVAADIVS DEGRARVLEA AGSVDILVTN AGGPPPGNWA DWTRDDFIRA LDANMLTPIA
LMTALLPGMI DKGWGRVVNI TSQSVRAPIP ALGLSNSARA GLTGYVAGTS RQVAQHGVCI
NNLLPGIHDT DRAEALDRNV MKAQGISFDE ARAQRAAAIP TRRYGQAEDF GAACAFLCSE
QARFIVGQNL LVDGGGTNLT V
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