Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1978 |
Symbol | |
ID | 5082342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2019367 |
End bp | 2020026 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640483540 |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_001168174 |
Protein GI | 146278015 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.145869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.127834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAG GCCCGGACGA GGAGGATCCG GCAGAGCGCA AGATGCGGTT CCTGTTCGCC GTCCGCTCGC GCGGCGTCAC CGATGCCCGC GTGCTCGCCG CGATGGAGCG GATCGACCGC GGCGCCTTCG TCCGGGGCAT CTTCGCCGAC CGCGCCTACG AGGACATGCC GCTTCCCATC GCCTGCGGCC AGACCATCAG CCAGCCCTCG GTCGTGGGGC TGATGAGCCA GGCGCTGGCG ATCAATCCGC GCGACAAGGT GCTCGAGATC GGAACCGGAT CGGGCTATCA GGCCGCGATC CTGAGCCAGC TTGCGCGCCG CGTCTACACC GTCGATCGCC ACCGGCGGCT GGTGCGGGAA GCGACCGAGC TGTTCCATCG GCTGGGGCTG ACCAACATCA CCGCCCTGGC CGCCGACGGC AGTTTCGGCC TGCCGGAACA GGCGCCCTTC GACCGCATCC TCGTCACCGC CGCCGCCGAG GATCCGCCGG GGCCCCTGTT GGCACAGCTC AAGATCGGCG GTATCATGGT GGTCCCGGTC GGGCAGACCG ACGCCGTGCA GAACCTGATC AAGGTGACGC GGCTCGAGCA GGGCTACGAC TACGAGGAAC TTCGCCCGGT GCGCTTCGTG CCGCTGATCG AAGGGATCGG GACCGACTGA
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Protein sequence | MTAGPDEEDP AERKMRFLFA VRSRGVTDAR VLAAMERIDR GAFVRGIFAD RAYEDMPLPI ACGQTISQPS VVGLMSQALA INPRDKVLEI GTGSGYQAAI LSQLARRVYT VDRHRRLVRE ATELFHRLGL TNITALAADG SFGLPEQAPF DRILVTAAAE DPPGPLLAQL KIGGIMVVPV GQTDAVQNLI KVTRLEQGYD YEELRPVRFV PLIEGIGTD
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