Gene Rsph17025_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1924 
Symbol 
ID5084049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1967918 
End bp1968610 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID640483486 
Producttwo component transcriptional regulator 
Protein accessionYP_001168120 
Protein GI146277961 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.781724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.399122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCG CCGACCAGCC CGTCGTCCTG CTCGTCGAGG ACGAGCCCGC CCAGCGCGAG 
GTTCTGTCCT ACAACCTCGA ATCCGAAGGC TTTCGCGTGG TGCAGGCGGG CACCGGCGAC
GAGGCGCTGA TGCTTGTCGA GGAGACGGGG CCGGATGTGA TCGTGCTCGA CTGGATGCTG
CCGTCGGTCT CGGGCATCGA GGTCTGCCGC CAGCTGAAGT CGCGCCCCTC GACGCGCTCG
GTGCCGATCA TCATGCTCTC GGCCCGCTCG GAAGAGGTGG ACCGGGTGCG CGGCCTCGAG
ACCGGGGCCG ACGACTATGT GGTCAAGCCC TATTCGGTGG TCGAGCTGAT GGCCCGCGTG
CGCAGCCAGC TTCGCCGCGC GCGGCCTTCG AGTGTGGGGC TCACGCTCGA GTTCGAGGAC
ATCCGCCTCG ATCCCGAGAC CCACAAGGTT CACCGCGCCG GCCAGATCCT CAAGCTCGGC
CCGACCGAGT TCCGGCTGCT CTCGACCTTC ATGGAAAAGC CGGGCCGGGT CTGGAGCCGC
GAACAGCTTC TCGACCGCGT CTGGGGCCGG GACATCTATG TGGACAGCCG CACCGTCGAT
GTCCATGTGG GCCGCCTGCG CAAGGCGCTC TGCGTGCACG GCGGCGAGGA TCCCGTCCGC
ACCGTCCGCG GCGCGGGCTA CGCTCTGGGC TGA
 
Protein sequence
MSPADQPVVL LVEDEPAQRE VLSYNLESEG FRVVQAGTGD EALMLVEETG PDVIVLDWML 
PSVSGIEVCR QLKSRPSTRS VPIIMLSARS EEVDRVRGLE TGADDYVVKP YSVVELMARV
RSQLRRARPS SVGLTLEFED IRLDPETHKV HRAGQILKLG PTEFRLLSTF MEKPGRVWSR
EQLLDRVWGR DIYVDSRTVD VHVGRLRKAL CVHGGEDPVR TVRGAGYALG