Gene Rsph17025_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1913 
SymbolihfA 
ID5084038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1958036 
End bp1958338 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content65% 
IMG OID640483474 
Productintegration host factor subunit alpha 
Protein accessionYP_001168109 
Protein GI146277950 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.749601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA AGACCTTGAC GCGCATGGAC CTGAGCGAAG CGGTGTTCCG CGAGGTGGGC 
CTGTCGCGCA ATGAATCCGC GCAATTGGTG GAGTCCGTGC TCCAGCATGT GTCGGACGCG
CTGGCCTCGG GCGAGACGGT GAAGATCTCG TCCTTCGGCA CCTTCACGGT GCGTGACAAG
TCGGCGCGGA TCGGACGGAA TCCCAAGACG GGCGACGAGG TGCCGATCTC GCCCCGCCGC
GTCCTGACCT TCCGCCCCTC GCATCTGATG AAGGAGCGTG TCGCCGCCGG CGGCAAGAAC
TGA
 
Protein sequence
MSDKTLTRMD LSEAVFREVG LSRNESAQLV ESVLQHVSDA LASGETVKIS SFGTFTVRDK 
SARIGRNPKT GDEVPISPRR VLTFRPSHLM KERVAAGGKN