| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1857 |
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| Symbol | |
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| ID | 5084918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1901038 |
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| End bp | 1903587 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483416 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001168053 |
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| Protein GI | 146277894 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.874221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCAGGT TCGTAGGCTC GGTCTTCGGG GCCATCTTCA CCGCGATCAC GCTGGGCCTG
CTGGCGCTGG CGCTGACCCT GGGTGCGGTG TTCTGGATGT ATTCCCGCGA CCTGCCGAGC
CATGAGAGTC TTGCGCAATA CAGCCCTCCC ACGATCAGCC GGATCTATTC GGGCGAAGGG
CGGATCATCG ACGAATTCGC GCAGGAGCGG CGGATCTTCG CGCCGATCGA GGAGATCCCG
GATCTGGTCA AGAACGCCTT CATCTCGGCC GAGGACAAGA ACTTCTACAG CCACCACGGC
TATGACGCCC GCGGGATCGC CGTCGCCGCC TTCGAGGCGG TGCGCTCGCG CGGGCAGAAC
GTGCGCGGCG CCTCGACCAT CACCCAGCAG GTGATGAAGA ACTTCCTGCT GTCGGGAGAC
CGGACGGGCG AGCGCAAGAT CAAGGAGATC ATCCTCGCGA CCCGGATCGA GGAGACGCTG
CCCAAGGACA AGATCCTCGA ACTCTATCTG AACGAGATCT TCCTCGGCCA GAACAGCTAC
GGGGTGGCGG CGGCGGCCCA GACCTATTTC AACAAGACGC TCTCGCAGCT GACCTTGGCC
GAGGCCGCGA CACTGGCCTC GATGCCGCAG GCGCCCAGCC AGTATCATCC GGTGCGGGCG
AAGGAGCGGC TGACCCAGCG GCGCAATTAC GTCCTGCGCG AGATGTTCGA GAACGGCTAC
ATCGACGAGG CGACGCTGAC CTCGTCTCTG AACGAGCCGC TGCGCTCGGT GCAGAACGGC
GATTATCCCG CCTTCCGCGA GGCGCTGCCC CCGCGCGACT ATTTCACCGA CGAGATCCGT
CGGCAGCTCT CGTCCGAGTT CGGCGAGCAG GAGTTCTTTG GCGGTGGCCT GACGATCCGC
GCCACCATTG ACCGCGAGCT TCAGGAGCAG GCGGCGGCGG CGCTGCGCGA GGGCCTCGAG
AAGTATGACC GCAGCCTCGG GATCTGGCGC GGCACCCGGC AGGTGATCCC GGCCGAGCGG
CTCGGCTCGG AGGCCGACTG GCGCGCGGCG CTGGCCGAGA CGCCTGTGCC GCGCGACGTG
CCGGGCTGGC ATCCGGCCGT GGTGCTCGAG GTGGGCGACA GCTCCGCCCG GATCGGCATC
GAGGGCGTCG AGGAGGACGA GGACGGCCAC TACATCCCCG CCGAGGACGT GACATGGGCG
CGCAAGCGGC AGGCGGATGG CCGGCTCGGC CGCAAGGCGC AGTCGGCGGG CGATCTGGTC
GCGGTCGGGG ATGTCGTTCT GGTGCGCGGG CTCAAGGCCG AGGACGGCAG CCTGCGCCGC
TGGTCGCTGC GGCAGGTGCC CGAGGTTCAG GGCGCCTTCA TGGCGATGGA TGTGAACTCG
GGCCGGGTCC TCGCGATGCA GGGCGGCTTC AGCTACCAAT ATTCCGTCTT CAACCGCGCC
ACGCAGGCCA CGCGCCAGCC GGGATCGAGC TTCAAGCCCT TCGTCTATGC GACGGCGCTG
GATTCAGGGT TCACCCCGGC CACCATCGTC ATCGACGCCC CGATCGAGGT GCAGACCGCA
CAGGGTCTCT GGACGCCCAA GAACGCCTCG GGGAAATACT ACGGGCCGAC GCCGCTGCGC
ACGGGGGTCG AGCAGTCGCG GAACCTGATG ACCGTCCGCA TCGCTCAGGA GATCGGCATG
GACACCGTGG CCTCCTATGC CGAGCGTTTC GGGGTCTATG ACCGGATGGG GCAGTTCCTC
GCCAACGCTC TCGGTGCGGA AGAGACGACG CTGTTCAAGA TGGTGGCGGC CTACGCCATG
TTCGCCAATG GCGGCGAGCG GGTGCAGCCC ACCCTCGTGG ACCGGGTGCA GGACCGCTTC
GGGCGCACGA TCTATCGCCA TGACCAGCGG ATCTGCGAGG ATTGCGCCCA GCCGCTGCTG
CCTGATGGCC GCGCGCCGCG CATCACCTCC AAGCGCGAGC GGGTGATGGA TGCGATCACC
GCCTATCAGC TCACCTCGAT GATGGAGGGC GTGGTCAAGC GCGGCACGGG GCGGGGGATC
AACCTGCCCG TGCCGGTGGC GGGCAAGACC GGCACCACGA ACGACGCCAA GGATGTCTGG
TTCATCGGCT ACACCTCGAA CATCGTGGCG GGCTGCTACA TCGGCTACGA CCAGCCGCGG
TCGATGGGCT CGGCCTCGGG CGGTGGTTTC TGCGGGCCGG TGTTCCAGAG CTTCATGAGC
AAGGCGGTGC AGAAATACGG CGGCTCCGAA TTCCGCGTGC CGCCGGGCGG TTATTTCATC
AAGATCGACC GCTTCACCGG GGCCCGGCTG CCCGACGACG CGACCGGCGA CAACGTGGTG
GCCGAGTATT TCCGGCAGGG CGAGGATCCG GTTTTCGGCA TGGGCGCGCT GGTCGATGGC
GGCTTTGCCA TGGGATCGAA CCTGCCGCTC TTCGCCTATG GCGAGGATGA GACCGAGCAG
GGCTCGACCG TCACGACCGC CACGGGCGAG CGGAAGGTCA TCCCCAGGAA AGCCGATTTC
GGCACGCTCA GTTCGGGCGG TCTCTACTGA
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| Protein sequence | MFRFVGSVFG AIFTAITLGL LALALTLGAV FWMYSRDLPS HESLAQYSPP TISRIYSGEG
RIIDEFAQER RIFAPIEEIP DLVKNAFISA EDKNFYSHHG YDARGIAVAA FEAVRSRGQN
VRGASTITQQ VMKNFLLSGD RTGERKIKEI ILATRIEETL PKDKILELYL NEIFLGQNSY
GVAAAAQTYF NKTLSQLTLA EAATLASMPQ APSQYHPVRA KERLTQRRNY VLREMFENGY
IDEATLTSSL NEPLRSVQNG DYPAFREALP PRDYFTDEIR RQLSSEFGEQ EFFGGGLTIR
ATIDRELQEQ AAAALREGLE KYDRSLGIWR GTRQVIPAER LGSEADWRAA LAETPVPRDV
PGWHPAVVLE VGDSSARIGI EGVEEDEDGH YIPAEDVTWA RKRQADGRLG RKAQSAGDLV
AVGDVVLVRG LKAEDGSLRR WSLRQVPEVQ GAFMAMDVNS GRVLAMQGGF SYQYSVFNRA
TQATRQPGSS FKPFVYATAL DSGFTPATIV IDAPIEVQTA QGLWTPKNAS GKYYGPTPLR
TGVEQSRNLM TVRIAQEIGM DTVASYAERF GVYDRMGQFL ANALGAEETT LFKMVAAYAM
FANGGERVQP TLVDRVQDRF GRTIYRHDQR ICEDCAQPLL PDGRAPRITS KRERVMDAIT
AYQLTSMMEG VVKRGTGRGI NLPVPVAGKT GTTNDAKDVW FIGYTSNIVA GCYIGYDQPR
SMGSASGGGF CGPVFQSFMS KAVQKYGGSE FRVPPGGYFI KIDRFTGARL PDDATGDNVV
AEYFRQGEDP VFGMGALVDG GFAMGSNLPL FAYGEDETEQ GSTVTTATGE RKVIPRKADF
GTLSSGGLY
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