| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1849 |
|---|
| Symbol | |
|---|
| ID | 5084910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1890321 |
|---|
| End bp | 1891577 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640483408 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001168045 |
|---|
| Protein GI | 146277886 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.513333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGG TCCTTGCCGC CACCTGGCCG CTTCTGCTGG GCGTCATGCT GCTGATGGTC
GGCAACGGGG TCCAGGCCTC GCTGCTGGGC ATCCGCGGCG CGATCGAGGG ATTCTCGACC
ACACAGCTGG CCGTCGTGAC CTCGGCCTAC TTCGCGGGAT TCCTCGTGGG CTCGCAGGTC
GTGCCCGACC TGATCCGCCG GGTGGGCCAT GTGCGGGTCT TTGCGGCGCT CGGGTCGATG
ATCTCGGCGG TGCTGGTGGT CTATCCGGTG ATGCCCGATT GGGCGGTCTG GACGCTGCTG
CGGGTGCTGA TCGGTTTCAG CTTCTCGGGC GTCTACATCA CCGCCGAGAG CTGGCTGAAC
AACACCGCGA CGAACGAGAC GCGGGGACAG GCGATGTCGG CCTACATGAT GGTGCAGATG
GTGGGCATCA TCACGAGTCA GGCGCTGCTG AACGCGGCCG ATCCGTCGGG CTTCACCCTC
TTCGTGATCC CCTCGGTGCT CGTGTCGCTG GCCTTCATGC CGATCCTTCT GACCGTGACG
CCCACGCCGA CCTTCGAGAG CACCCGGAGG CTCTCGGTGC GCGAGCTGTT TCGCGTGTCG
CCGCTGGGCA TCGTGGGGAT GCTGATGACC GGCGGGATCT TCTCGGCCAT GTTCGGCATG
GCCTCGGTCT GGGGCACGCT CGAGGGACTC TCGGTGCAGG AGATCTCGAT CTTCATCGGC
TCGATCTATG TCGGAGGCCT CGTGCTGCAA TATCCGATCG GCTGGGCCTC GGACCGGATG
GACCGGCGTC AGCTGATCCT CGGGCTTGCC GTGGTGGCGG GGCTGCTGAT GGGGGTGACC
GTCCTGTTCC AGCCGCCCTT CTGGGGGCTG ATCGCGGTCG CGCTGCTGCT CGGCGGGATC
ACCAACCCCG TCTATTCGCT GCTGATCGCC TATACCAACG ATTTCCTCGG CAAGGAGGAC
ATGGCGGCCG CCTCGGCGGG GCTCTTGTTC ATGAACGGGC TGGGGGCGGT CTGCGGGCCG
CTCGTGACGG GCTGGATCAT GGAACAGGCG GGGCCGCGCG GCTTCTTTCT CTTCATCGGC
CTGCTTTACG GGGCGATGGC GATCTATGCG GGCTGGCGGA TGACGCGGCG TGCGGCGCCC
GCGGTGGCCG ACACGGGCTC CTTTGCATCC GTCGCGCCGA CCGCCTCGTC GGTGGCCGTC
GGCGCCGTCA TGGAAGTGGT CACCGAGGCG CAGGAGGCGC AGCAGGCGGC CGAGTGA
|
|---|
| Protein sequence | MFKVLAATWP LLLGVMLLMV GNGVQASLLG IRGAIEGFST TQLAVVTSAY FAGFLVGSQV
VPDLIRRVGH VRVFAALGSM ISAVLVVYPV MPDWAVWTLL RVLIGFSFSG VYITAESWLN
NTATNETRGQ AMSAYMMVQM VGIITSQALL NAADPSGFTL FVIPSVLVSL AFMPILLTVT
PTPTFESTRR LSVRELFRVS PLGIVGMLMT GGIFSAMFGM ASVWGTLEGL SVQEISIFIG
SIYVGGLVLQ YPIGWASDRM DRRQLILGLA VVAGLLMGVT VLFQPPFWGL IAVALLLGGI
TNPVYSLLIA YTNDFLGKED MAAASAGLLF MNGLGAVCGP LVTGWIMEQA GPRGFFLFIG
LLYGAMAIYA GWRMTRRAAP AVADTGSFAS VAPTASSVAV GAVMEVVTEA QEAQQAAE
|
|---|
| |