| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1753 |
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| Symbol | |
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| ID | 5083659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1789457 |
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| End bp | 1790764 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640483313 |
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| Product | phage major capsid protein, HK97 |
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| Protein accession | YP_001167951 |
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| Protein GI | 146277792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.357661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGA TTACGGCCCT GCGAGCCCGC CGCGCGGGCA TCCTCGACCA GATGGAAGCG
CTGATCGCCT CGGTCCCCGA GGGTGACGAC ATGACCTCCG ATCAGGCGGC GCAGTTCGAC
GCGCTGAAGG CGGACGACGA CAAGGTGGCC GCGGAGCTCA CCCGCGCGGA AGACCTGGAG
CGCCGCCGCG CCGCCGCTGC GCGACCGGCG GCCGCTCTTC CCGGCGTGAC GCCGCCGGCT
GCATCGGTCC CGGCGCAGCC GGCCGAGAAG GGCATCACCT TTGCGCGCAT GGTCCGCACG
ATCGCGGCCG CCGGTGGCAA CGCATATGTT GCCGGACAGA TCGCCGAGGC GAACGGGGAC
AGCGGCCTCT TCGCAAACCA GAACATGGGG TCTGGCGCGG CTGGTGGCTT CCTCGTGCCC
GAGGATGTGT CGGCCGAGGT CATCGAGCTC CTTCGCCCTG CGAGCGTCGT CACGGCGATG
GGGCCGCGCA TCGTGCCGAT GCCGAATGGC AACCTTACCA CCAACCGGCG TGCGACCGGA
GCGACGTTCG GTTACGGCGG CGAGCAGACC GACGCTCCCG CCACCGGCTA CAACTATGGG
CAGGTGAAGC TCTCGGCGAA GAAGCTGCGT GGCATCATCC CCGTTTCGAA CGACCTGCTG
CGCTCCGCCT CCGTGTCGGT TGATCGGATG ATCCGTGATG ATGCGGTCGC CGACGCTGCT
CTGATCCAGG ACCGCTACTT CCTGCGCGGC GCCGGGACGG AGTTCGCGCC CCGCGGCCTT
CGCTATCAGC ATGTCGGGAC TCCGTTCGAA GAGACCCATG TCTTGGCCAT GACCGCTTCG
CCGACGCTGC AGAAGGTGAC CAACGACTTG GCGCGTCTCG AACTGGCGCT TGCGAACGCG
AACGTGGTGC AGACCAACGC CCACTGGATC ATGTCGCCGC GCACCGAGAG CTATCTGGCG
AACCTGCGCG ACGGGAACGG CAACCTTGCC TTCCCGGAAA TGCAGAATGG CGTGCTGCGC
CGGAAGCCCG TTCACGTCAC CACCGAGATC CCGGACAACC TCGGCGTCGG CGGAAACGAA
AGCGAGCTCA TGCTGGCCGA TCCCACGCAC ATCATGGTGG GTGAGCACAT GGGTATCGAA
ATCGCGATGT CCACCGAGGC CGCTTACAAG GATGCGTCCG GCACGATGCA GGCGGCGTTC
TCGCGCGATG AGACGCTGAT GCGGATGATC ATGCAGCACG ACATCGGGCT GCGGCATCTC
GCTGCCGTGG CCATTCTGAC CGGCGTCACC TGGTCGCCGG CCCCCTGA
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| Protein sequence | MDRITALRAR RAGILDQMEA LIASVPEGDD MTSDQAAQFD ALKADDDKVA AELTRAEDLE
RRRAAAARPA AALPGVTPPA ASVPAQPAEK GITFARMVRT IAAAGGNAYV AGQIAEANGD
SGLFANQNMG SGAAGGFLVP EDVSAEVIEL LRPASVVTAM GPRIVPMPNG NLTTNRRATG
ATFGYGGEQT DAPATGYNYG QVKLSAKKLR GIIPVSNDLL RSASVSVDRM IRDDAVADAA
LIQDRYFLRG AGTEFAPRGL RYQHVGTPFE ETHVLAMTAS PTLQKVTNDL ARLELALANA
NVVQTNAHWI MSPRTESYLA NLRDGNGNLA FPEMQNGVLR RKPVHVTTEI PDNLGVGGNE
SELMLADPTH IMVGEHMGIE IAMSTEAAYK DASGTMQAAF SRDETLMRMI MQHDIGLRHL
AAVAILTGVT WSPAP
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