Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1700 |
Symbol | |
ID | 5083432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1746409 |
End bp | 1747869 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483258 |
Product | proton-translocating NADH-quinone oxidoreductase, chain M |
Protein accession | YP_001167898 |
Protein GI | 146277739 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0282324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTACG ACATGGAACT GACCGCGCTC ATCCTGCTGC CGTTCTTCGG CGGGATCGCC GCGCTCTTCG CCGGGCGCTG GGGACGGGAC GCCGAGCGCT GGGTGGCGAT CGCAGCCCTC GGGCTCGCGC TCCTGATCCT GATCTCGAGC TTCTTCTCGG ACGGAGACGG CCGCTGGATC GCGATCGAGC GCTACGACTG GGCGCCCTCT CTCGGGTTGC AGGTGATCCT GGCCATGGAC GGGCTCTCGG GCGCGCTGCT GGTCGTGTCG CTGGCCCTGG GGATCGTCTC GGTCATCGTC TCCTGGAAGA TCACCGAATA TTCGGGGCTG CTGAACGCGG CGCTCCTCTG GACGGTGGCG GCCTCGAACG GGGTGTTCCT GTCGTTCGAC CTCCTCGTCT TCGCCTTCTT CTGGGAGTTG ATGCTGGTCC CCTCGTTCCT GCTGATCTCG GTCTGGGGCC ACGGCGACCG CGAGGCGGCG GCGCTGAAGT TCCTCGTCTT CAACGCCGTG GCGGGGCTCG GGCTGCTGGC GGCGGTCTTC TATCTGGGAG CCACCGGCGA CACGGTGACC TTCGACGCCT TCGAGGTGGC CGAGCGTCAG ATCCCGCATG GGGTGCAGGT TCTGCTGCTG CTGGGCTTTG CGGCCGCCTT CCTCGTGAAG CTGCCGGTGC CGCCGCTGCA TGCGTGGCTG CCGGATGCGC ACACGCAAGC ACCGACGGCG GGCTCGATCC TGCTTGCGGG GCTTCTGCTC AAGACCGGGG CCTACGGGCT TTTCCGCTTC CCGCCGATGC TCTTCCCCGA GGGCTTCGCC ACGCTCGCCC CCTTCGGGCT TGCGCTTGGC GCCTTCGGCT CGATCTACGG GGCGCTGCTG GCCTGCGGGC AGACCGACGC GAAGCGGCTG GTGGCCTACA CCTCGGTCGC GCACATGAGC ATCGTGCTGA TGGGCATCTG CGGCGGCGTC TATTTCTCGC TCATGGGCGC GGGTGTCGAG ATGGTGGCCC ATGCCTTCTC GGCCTCGGCG CTGTTCCTGC TGATCGGCGC GCTCTATGAC CGGACCGGCA CGCGCGACCT GCGCGAACTG GGCGGGCTGC AGCAGAACGC GCCCCGCTTT GCCGCGGCCT TCGCGGTCTT CTTCTCGGCC GCGCTCGCCA TGCCGGGCAC GGCGAACTTC CTCGGCGAGG CGCTGGTCAT CACCGGCATG TTCCAGGTGA ACTGGATCTT CGCCTCGATC ACGCTGATCT CGCTGGTGAT CTCGGTCGTC TATGCGACGC GGCTGTTCAA GCGGGTGGTG TTCGGCAAGT CGCGCCGGAC CGAGGCGCTC GAGGATCTGA CGCTGCGCGA GATGGGGCCG ATCGTGCTGC TCGCGGTGGC GACCCTTCTG TTCGGGATGC TGCCGCAACT CCTGATGGGT GCGCTCGAAG GCGCGGTCGA GGCGGCCCTT GTCCCGGTGA CGGTCCCCTG A
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Protein sequence | MGYDMELTAL ILLPFFGGIA ALFAGRWGRD AERWVAIAAL GLALLILISS FFSDGDGRWI AIERYDWAPS LGLQVILAMD GLSGALLVVS LALGIVSVIV SWKITEYSGL LNAALLWTVA ASNGVFLSFD LLVFAFFWEL MLVPSFLLIS VWGHGDREAA ALKFLVFNAV AGLGLLAAVF YLGATGDTVT FDAFEVAERQ IPHGVQVLLL LGFAAAFLVK LPVPPLHAWL PDAHTQAPTA GSILLAGLLL KTGAYGLFRF PPMLFPEGFA TLAPFGLALG AFGSIYGALL ACGQTDAKRL VAYTSVAHMS IVLMGICGGV YFSLMGAGVE MVAHAFSASA LFLLIGALYD RTGTRDLREL GGLQQNAPRF AAAFAVFFSA ALAMPGTANF LGEALVITGM FQVNWIFASI TLISLVISVV YATRLFKRVV FGKSRRTEAL EDLTLREMGP IVLLAVATLL FGMLPQLLMG ALEGAVEAAL VPVTVP
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