Gene Rsph17025_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1700 
Symbol 
ID5083432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1746409 
End bp1747869 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content68% 
IMG OID640483258 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_001167898 
Protein GI146277739 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0282324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTACG ACATGGAACT GACCGCGCTC ATCCTGCTGC CGTTCTTCGG CGGGATCGCC 
GCGCTCTTCG CCGGGCGCTG GGGACGGGAC GCCGAGCGCT GGGTGGCGAT CGCAGCCCTC
GGGCTCGCGC TCCTGATCCT GATCTCGAGC TTCTTCTCGG ACGGAGACGG CCGCTGGATC
GCGATCGAGC GCTACGACTG GGCGCCCTCT CTCGGGTTGC AGGTGATCCT GGCCATGGAC
GGGCTCTCGG GCGCGCTGCT GGTCGTGTCG CTGGCCCTGG GGATCGTCTC GGTCATCGTC
TCCTGGAAGA TCACCGAATA TTCGGGGCTG CTGAACGCGG CGCTCCTCTG GACGGTGGCG
GCCTCGAACG GGGTGTTCCT GTCGTTCGAC CTCCTCGTCT TCGCCTTCTT CTGGGAGTTG
ATGCTGGTCC CCTCGTTCCT GCTGATCTCG GTCTGGGGCC ACGGCGACCG CGAGGCGGCG
GCGCTGAAGT TCCTCGTCTT CAACGCCGTG GCGGGGCTCG GGCTGCTGGC GGCGGTCTTC
TATCTGGGAG CCACCGGCGA CACGGTGACC TTCGACGCCT TCGAGGTGGC CGAGCGTCAG
ATCCCGCATG GGGTGCAGGT TCTGCTGCTG CTGGGCTTTG CGGCCGCCTT CCTCGTGAAG
CTGCCGGTGC CGCCGCTGCA TGCGTGGCTG CCGGATGCGC ACACGCAAGC ACCGACGGCG
GGCTCGATCC TGCTTGCGGG GCTTCTGCTC AAGACCGGGG CCTACGGGCT TTTCCGCTTC
CCGCCGATGC TCTTCCCCGA GGGCTTCGCC ACGCTCGCCC CCTTCGGGCT TGCGCTTGGC
GCCTTCGGCT CGATCTACGG GGCGCTGCTG GCCTGCGGGC AGACCGACGC GAAGCGGCTG
GTGGCCTACA CCTCGGTCGC GCACATGAGC ATCGTGCTGA TGGGCATCTG CGGCGGCGTC
TATTTCTCGC TCATGGGCGC GGGTGTCGAG ATGGTGGCCC ATGCCTTCTC GGCCTCGGCG
CTGTTCCTGC TGATCGGCGC GCTCTATGAC CGGACCGGCA CGCGCGACCT GCGCGAACTG
GGCGGGCTGC AGCAGAACGC GCCCCGCTTT GCCGCGGCCT TCGCGGTCTT CTTCTCGGCC
GCGCTCGCCA TGCCGGGCAC GGCGAACTTC CTCGGCGAGG CGCTGGTCAT CACCGGCATG
TTCCAGGTGA ACTGGATCTT CGCCTCGATC ACGCTGATCT CGCTGGTGAT CTCGGTCGTC
TATGCGACGC GGCTGTTCAA GCGGGTGGTG TTCGGCAAGT CGCGCCGGAC CGAGGCGCTC
GAGGATCTGA CGCTGCGCGA GATGGGGCCG ATCGTGCTGC TCGCGGTGGC GACCCTTCTG
TTCGGGATGC TGCCGCAACT CCTGATGGGT GCGCTCGAAG GCGCGGTCGA GGCGGCCCTT
GTCCCGGTGA CGGTCCCCTG A
 
Protein sequence
MGYDMELTAL ILLPFFGGIA ALFAGRWGRD AERWVAIAAL GLALLILISS FFSDGDGRWI 
AIERYDWAPS LGLQVILAMD GLSGALLVVS LALGIVSVIV SWKITEYSGL LNAALLWTVA
ASNGVFLSFD LLVFAFFWEL MLVPSFLLIS VWGHGDREAA ALKFLVFNAV AGLGLLAAVF
YLGATGDTVT FDAFEVAERQ IPHGVQVLLL LGFAAAFLVK LPVPPLHAWL PDAHTQAPTA
GSILLAGLLL KTGAYGLFRF PPMLFPEGFA TLAPFGLALG AFGSIYGALL ACGQTDAKRL
VAYTSVAHMS IVLMGICGGV YFSLMGAGVE MVAHAFSASA LFLLIGALYD RTGTRDLREL
GGLQQNAPRF AAAFAVFFSA ALAMPGTANF LGEALVITGM FQVNWIFASI TLISLVISVV
YATRLFKRVV FGKSRRTEAL EDLTLREMGP IVLLAVATLL FGMLPQLLMG ALEGAVEAAL
VPVTVP