| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1657 |
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| Symbol | |
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| ID | 5082735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1697725 |
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| End bp | 1699050 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640483215 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001167855 |
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| Protein GI | 146277696 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.108649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.937056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTT ATACCGCTCA GAGCTTCGCG CAGCGTCAGT CGCTCGTCGT GACCGCGCAG
TTGCAGCAGG CGATCTGCCT GCTCCAGATG CCCAACGCGG AACTGTCCTC GTTCATCGAG
ACACAGTCCG AGGAAAACCC GTTCCTCGAG CTGCGGCTGC CCCCGGCGCC CGCGCCGTCC
TCGGCGTTGC CCCGCAGCCA GGCGGCGGCG GGCGACGACT GGGACCGTGT GGCGGGCCTT
GCCGCCGATC CGGGGCCGTC GCTCTATGTC CATGTCACCG CCGAGATCGC CCGGCTGGGT
CTCACGGCCG AGGAGAGCGC CGCCGCCTCG GTCTTTCTGG ATGCGCTCGA ACCCTGGGGA
TGGCTTGGCC AGCCGCTCGA GCTGCTGGCC CCGCGCGCGG GTCTCTCGCT CGAGGCGGCC
GAGCGGCTGC TGGCGAAGCT GCACAGGATC GAACCGGCCG GTCTCTTCGC CCGCTCGCTC
GCCGAGTGCC TGCGGCTGCA GGCCAGCGAG CAGGGGCTTC TGACGCCGCT CTTTGCCGCC
GTGCTCGACC ATCTGTCGCT GCTGGCCGCC GCCGACCTGC GCGGGCTCTG CCGCGCCTGC
GGCTGCGGCA TGGAGGAGCT GAAGGCCGTC CTGCGCCAGC TGCGCGGGCT CAATCCCAAG
CCGGGTGCGC TGTTCGATGC CGCCCCCTCG CCGCAGCGCC CGCCGGATCT GCTGGTCAGC
CCCGGCCCCG ATGGCTGGCG CGTGGATCTC AACCGCTCGA CACTGCCCAC GGTTGTGGTG
CGCGCCGACA CGGCGCAGGA CTTCGCCGGA AGCGCCGCGC CCTATGTCGG CGAGCGGCTC
TCGGTGGCCC GCTGGCTGGC CCGCGCGGTC GAGCACCGGA ACCAGACGAC GCTCAAGATC
GGTGCGGAAG TGGTGCGCCG GCAGCGCGGC TTCCTCGAGG AGGGCCCGGC GCGGATGGAG
CCGATGACGC TGCGCGAGGT GGCCGATGCG GTGGGCGTGC ACGAAAGCAC GGTGAGCCGC
GTGAGCTCCG GTCTGATGAT CGCCACGCCG CAGGGCACCT TTCCGCTGAA GTCGTTTTTC
ACGGCCGCTC TCTCGGCGCG CGAGGGGGAC ACGGCCGGTT CGGCCGCGGC CGTCCGCCAT
CGCGTGCGCC AGCTGGTCCA GGCGGAGTCG CCGGATGATC CCCTGAGCGA CGATGCCATC
GCCCGCATCA TCTCGGACGA GGGCGTGACG CTGGCCCGCC GCACGGTGGC CAAATACCGC
GAGCAGCTCA ACATTCCGTC CTCGGTCCAG CGCCGGCGGC AGGCGCTGGT GACGGGCGCG
CTCTAG
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| Protein sequence | MQLYTAQSFA QRQSLVVTAQ LQQAICLLQM PNAELSSFIE TQSEENPFLE LRLPPAPAPS
SALPRSQAAA GDDWDRVAGL AADPGPSLYV HVTAEIARLG LTAEESAAAS VFLDALEPWG
WLGQPLELLA PRAGLSLEAA ERLLAKLHRI EPAGLFARSL AECLRLQASE QGLLTPLFAA
VLDHLSLLAA ADLRGLCRAC GCGMEELKAV LRQLRGLNPK PGALFDAAPS PQRPPDLLVS
PGPDGWRVDL NRSTLPTVVV RADTAQDFAG SAAPYVGERL SVARWLARAV EHRNQTTLKI
GAEVVRRQRG FLEEGPARME PMTLREVADA VGVHESTVSR VSSGLMIATP QGTFPLKSFF
TAALSAREGD TAGSAAAVRH RVRQLVQAES PDDPLSDDAI ARIISDEGVT LARRTVAKYR
EQLNIPSSVQ RRRQALVTGA L
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