| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1572 |
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| Symbol | |
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| ID | 5082383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1613162 |
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| End bp | 1614058 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640483130 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001167770 |
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| Protein GI | 146277611 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.013476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.683466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT ACACCAGTCT TCCCGCTCCG AGTCCTGAAC AGGGCCTCAA CCGCTACATG
CAGGAGATCC GCAAGTTTCC CCTGCTGGAG CCGGAAGAGG AATATATGCT GGCCAAGCGC
TGGGTCGATC ATCAGGACAA TCGCGCCGCG CACAGGCTCG TCACCTCGCA CCTGCGTCTG
GCGGCCAAGA TCGCCATGGG CTACCGCGGC TACGGGCTGC CGCAGGCCGA GGTGATCTCG
GAGGCGAACG TGGGCCTCAT GCAAGCGGTC AAGCGGTTCG ACCCCGAAAA GGGCTTTCGC
CTCGCGACCT ACGCGATGTG GTGGATTCGC GCCTCGATCC AGGAGTACAT CCTGCGGTCC
TGGAGCCTCG TGAAGCTCGG CACGACCTCG GCGCAGAAGA AGCTGTTCTT CAACCTGCGC
AAGGCCAAGG CGAAGCTCGG CGCGCTGGAG GAAGGCGACC TGCGGCCCGA GAACGTGGCC
CAGATCGCCA AGGATCTCAG CGTGACCGAG GCCGAGGTCA TCGACATGAA CCGCCGCCTG
TCCGCCTCGG ATGCCTCGCT CAACGCGACC ATCGGGTCGG ACGGTGACGG AGCCACGCAG
TGGCAGGACT GGCTCGAGGA TGAGGACAGC GACCAGGCGT CCGATTACGC CGAGCGCGAC
GAGCTGGAGA TCCGGCGCGA ACTGCTGGCG CAGGCGATGT CGGTGCTCAA CGACCGCGAG
AAGGACATTC TCGTGCAGCG CCGCCTGACG GATGATCCGG TCACGCTCGA GGAGCTGTCG
GACGGCTATG GCGTCAGCCG CGAGCGTATC CGTCAAATCG AGGTGCGCGC CTTTGAAAAG
CTGCAGGCCC GTATGCGAGA GCTTGCGCGC GGCAAGGGCA TGACGATCCC CGCCTGA
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| Protein sequence | MSSYTSLPAP SPEQGLNRYM QEIRKFPLLE PEEEYMLAKR WVDHQDNRAA HRLVTSHLRL
AAKIAMGYRG YGLPQAEVIS EANVGLMQAV KRFDPEKGFR LATYAMWWIR ASIQEYILRS
WSLVKLGTTS AQKKLFFNLR KAKAKLGALE EGDLRPENVA QIAKDLSVTE AEVIDMNRRL
SASDASLNAT IGSDGDGATQ WQDWLEDEDS DQASDYAERD ELEIRRELLA QAMSVLNDRE
KDILVQRRLT DDPVTLEELS DGYGVSRERI RQIEVRAFEK LQARMRELAR GKGMTIPA
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