| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1563 |
|---|
| Symbol | |
|---|
| ID | 5082374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1602436 |
|---|
| End bp | 1603398 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640483121 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001167761 |
|---|
| Protein GI | 146277602 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.202721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.40239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCGG CGCCCTTCCA CACCGAGATC GCGCGCGGGC CCGACGGCGT CCGTGCGCAG
TGGATCAGCG CCCAGGACGG CGTGCGGCTG CGCAGCGTGA TCTGGCCCGA GGGCGGCAGG
GGCACCGTGC TGCTCTTTTC GGGCCGCACC GAATATGCCG AGAAATACGG GCCCGCGGCC
GACCAGCTGC GCCGCCGCGG CTATGCCTCG GCCACGCTCG ACTGGCGCGG ACAGGGCCTC
TCCGACCGCT CGCTGCGCGA CCCTCTGGTG GGGCATATCG GCGACTTTGC CGAATATCAG
CGGGATGTTG CGGCGTTCGT CGCGCATGTC CGGGCGCAGG GCCTGCCGGA GCCCTATCAC
CTGCTGGCCC ATTCGATGGG GGGCAGCATC GGCCTGCGCG CGCTGCAGGA GGGGCTTGCG
GTGCGCTCGG CCTGCTTCTC GGCGCCGATG TGGGGCATCC GGGTCCATGC GGCGCTGCGG
GTCGTGGCGG CCGCCCTGGG GGCGCTTGCG CGCAGGACGG GGCTCGGCCA TCGCTATGTC
CCCGGCACCG GCACGCGCAG CTATGTGGTC GCCACCGCCT TCGAAGCGAA CGTGCTCACG
CGCGACCGCG AGATGTTCGC CTGGATGCAG GACCAGCTTG CGCGCGTGCC CGAACTGGGC
CTGGCCGGCC CCAGTCTCGA CTGGCTGCGT GCGGCCTTTG CCGAGACTCA TCGCCTTTCG
CATCTGCCCT CCCCCCGACT TCCCGCGCTC TGCATCGTGG GTTCGGCCGA GAAGGTCGTC
GATCTGGACG AGATCCGGCG CCGGATGGAC GGCTGGCGGG GCGGAGAGCT GCAGATCGTG
CCCGGCGCCG AGCATGAGGT GATGATGGAC CGCCCCGAGG TCCGCGACGC CTTCTTCGAC
GCCGCGACCG CCCTTTTCGA CCGGGCGGCC GAGGCCACCC CGCTCAGATC CGGATCTGCG
TGA
|
|---|
| Protein sequence | MSAAPFHTEI ARGPDGVRAQ WISAQDGVRL RSVIWPEGGR GTVLLFSGRT EYAEKYGPAA
DQLRRRGYAS ATLDWRGQGL SDRSLRDPLV GHIGDFAEYQ RDVAAFVAHV RAQGLPEPYH
LLAHSMGGSI GLRALQEGLA VRSACFSAPM WGIRVHAALR VVAAALGALA RRTGLGHRYV
PGTGTRSYVV ATAFEANVLT RDREMFAWMQ DQLARVPELG LAGPSLDWLR AAFAETHRLS
HLPSPRLPAL CIVGSAEKVV DLDEIRRRMD GWRGGELQIV PGAEHEVMMD RPEVRDAFFD
AATALFDRAA EATPLRSGSA
|
|---|
| |