Gene Rsph17025_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1559 
Symbol 
ID5084283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1598341 
End bp1598643 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content72% 
IMG OID640483118 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001167758 
Protein GI146277599 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.200208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.3644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCAG CCGACAGAGC CACGATCCGC CTCGACAAGT GGCTGGTGCA GGCGCGCTTC 
TTCAAGACGC GCGCCCTCGC CTCCGCCCTG GTCGAGGCGG GACGGGTCCG CCTGAACGGC
CAGCATGTCG CCAAGCCCGC GCAGCCGGTC GGCGAGGGTG ACATGCTCAC CTTTCCACAG
GGCGGGCGGA TCCGCCTCAT CCGGGTGGTC GCCGTGGGCG TCCGGCGCGG CCCGGCCAGC
GAGGCGCGCG GCCTTTACGA CGACCTGGAT ACCCCCCCTG CGGCCGCTTC GCCGCTTGAA
TGA
 
Protein sequence
MAAADRATIR LDKWLVQARF FKTRALASAL VEAGRVRLNG QHVAKPAQPV GEGDMLTFPQ 
GGRIRLIRVV AVGVRRGPAS EARGLYDDLD TPPAAASPLE