Gene Rsph17025_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1556 
Symbol 
ID5084280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1596285 
End bp1596998 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID640483115 
ProductGntR family transcriptional regulator 
Protein accessionYP_001167755 
Protein GI146277596 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0676227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGGC GGAAGTCACA GGGTCAGCAC TCTCCGATCA TGGGCATCGG CCAGATCGAG 
CGCGTCACCA TGGGAGAGCG CATCTACAAC GAACTGTGCC AGCTGCTGAT CGCGGGCAAG
CTGCAGCCGG GCGAGCGCCT GTCGCTGCGC ACCGTGGCCG AGGCGCTGGG CGTTTCGATG
ATGCCTGTCC GCGAGGCGGT GGCGCGGCTG GTCGCCGATG GCGCGCTGAC GGTCCATGCC
AACCGGGCGA TCACCGTGCC GCTGATGACG GTGGCGAAGC TGCGCGAGCT GACACGGATC
CGGATCGAGA TCGAGGGCTA TGCCGTGGCC GAGGCCGCCA CCCGCTGCAC CGCCGGGCAG
CTGGCCACCA TCGGCCGGCT CGACGCGGCC TTCCGGCAGG CGACGCTCGC CCCCGAAGGC
GGAAGCGACG ACTCGCTGCG GCTGAACAAG GAGCTGCATT TCGCGATCTA CGAGGCGGCC
GGCTCGCCGG TGCTGCTGTC GATCATCGAG GGGCTCTGGC TGAAGGTCGG GCCGATCTTT
AACCTCGACC TGCGCGCGGC CCGGCGTTTT TCGACCGGCG CGGCCGAGAA GCACCATGCG
GCGCTCGTGG CAGCCCTGAC GCGGCAGGAT CCCGAGGGCG CGCGGCAGGC GCTGTCCGCC
GACATCCTCA GCTCGCTCGA GTTCGTGGTG ACGACCGGGT CGCTGCCCGA CTGA
 
Protein sequence
MAGRKSQGQH SPIMGIGQIE RVTMGERIYN ELCQLLIAGK LQPGERLSLR TVAEALGVSM 
MPVREAVARL VADGALTVHA NRAITVPLMT VAKLRELTRI RIEIEGYAVA EAATRCTAGQ
LATIGRLDAA FRQATLAPEG GSDDSLRLNK ELHFAIYEAA GSPVLLSIIE GLWLKVGPIF
NLDLRAARRF STGAAEKHHA ALVAALTRQD PEGARQALSA DILSSLEFVV TTGSLPD