Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1556 |
Symbol | |
ID | 5084280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1596285 |
End bp | 1596998 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483115 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001167755 |
Protein GI | 146277596 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0676227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGGGC GGAAGTCACA GGGTCAGCAC TCTCCGATCA TGGGCATCGG CCAGATCGAG CGCGTCACCA TGGGAGAGCG CATCTACAAC GAACTGTGCC AGCTGCTGAT CGCGGGCAAG CTGCAGCCGG GCGAGCGCCT GTCGCTGCGC ACCGTGGCCG AGGCGCTGGG CGTTTCGATG ATGCCTGTCC GCGAGGCGGT GGCGCGGCTG GTCGCCGATG GCGCGCTGAC GGTCCATGCC AACCGGGCGA TCACCGTGCC GCTGATGACG GTGGCGAAGC TGCGCGAGCT GACACGGATC CGGATCGAGA TCGAGGGCTA TGCCGTGGCC GAGGCCGCCA CCCGCTGCAC CGCCGGGCAG CTGGCCACCA TCGGCCGGCT CGACGCGGCC TTCCGGCAGG CGACGCTCGC CCCCGAAGGC GGAAGCGACG ACTCGCTGCG GCTGAACAAG GAGCTGCATT TCGCGATCTA CGAGGCGGCC GGCTCGCCGG TGCTGCTGTC GATCATCGAG GGGCTCTGGC TGAAGGTCGG GCCGATCTTT AACCTCGACC TGCGCGCGGC CCGGCGTTTT TCGACCGGCG CGGCCGAGAA GCACCATGCG GCGCTCGTGG CAGCCCTGAC GCGGCAGGAT CCCGAGGGCG CGCGGCAGGC GCTGTCCGCC GACATCCTCA GCTCGCTCGA GTTCGTGGTG ACGACCGGGT CGCTGCCCGA CTGA
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Protein sequence | MAGRKSQGQH SPIMGIGQIE RVTMGERIYN ELCQLLIAGK LQPGERLSLR TVAEALGVSM MPVREAVARL VADGALTVHA NRAITVPLMT VAKLRELTRI RIEIEGYAVA EAATRCTAGQ LATIGRLDAA FRQATLAPEG GSDDSLRLNK ELHFAIYEAA GSPVLLSIIE GLWLKVGPIF NLDLRAARRF STGAAEKHHA ALVAALTRQD PEGARQALSA DILSSLEFVV TTGSLPD
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