| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1554 |
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| Symbol | |
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| ID | 5084278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1593751 |
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| End bp | 1594515 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640483113 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001167753 |
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| Protein GI | 146277594 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.203579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.799434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATCT TCGACCTTGC GGGGAAGACC GCGATCGTCA CCGGCGGGAA TGGCGGCATC
GGGCTTGCGA TGGCGCGCGG GCTGGCCGAG GCCGGGGCGC AGGTCGTCCT GATGGGGCGC
GACGGCGCCA AGGGCGCGGC GGCGGTCGGC GCGCTCGAAG AGGAGGGTCT GGCGGCCCAT
TTCGTCGAGG TGGATGTCAC GGCCGAAGAC CGGGTGGCGG CGGCGGTCGA GGAGGCCGCG
CGGATCGGCG GGCGGATCGA CATCCTTGTG AACAATGCCG GCATCGCGAT CCGCAAGCTG
CCGCAGGACT ACACGCTCGG GGACTGGCAC AAGGTGCTGG ACACGAACCT CACCAGCGCC
TTCCTCATGT CGCAGGCGGT CTATCCGGCG CTCTGCAGGG CGGGGGGTGG CAAGATCATC
AACATCGCCT CGGTGCTCGC CCTGCTGGGG GCGCCCTTCT CGGTGGCCTA TTCGGCCAGC
AAGGGCGGCC TCGTGCAGTT CACCCGCGCG CTCGCGACGG CCTGGGCGCC GGACAACATC
CAGGTGAACG CGATCCTGCC CGGCTGGATC GAGACCGAGC TGACCGTGCA GGCGCGCGCG
CAGGTGCCGG GGCTGAACGA TAACGTCCTG TCGCGGACGC CCGCGCGGCG CTGGGGCGCG
CCCGGCGACT TTGCCGGCCC CGCCGTCTTC CTGGCCTCCT CCGCGTCGGA TTTCGTGACC
GGCGCCTCTC TGGTCGTGGA CGGTGGCTTC ACCGTCCAGG GCTGA
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| Protein sequence | MKIFDLAGKT AIVTGGNGGI GLAMARGLAE AGAQVVLMGR DGAKGAAAVG ALEEEGLAAH
FVEVDVTAED RVAAAVEEAA RIGGRIDILV NNAGIAIRKL PQDYTLGDWH KVLDTNLTSA
FLMSQAVYPA LCRAGGGKII NIASVLALLG APFSVAYSAS KGGLVQFTRA LATAWAPDNI
QVNAILPGWI ETELTVQARA QVPGLNDNVL SRTPARRWGA PGDFAGPAVF LASSASDFVT
GASLVVDGGF TVQG
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