Gene Rsph17025_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1549 
Symbol 
ID5084273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1588371 
End bp1588868 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID640483108 
ProductTRAP-type mannitol/chloroaromatic compound transport system small permease component-like protein 
Protein accessionYP_001167748 
Protein GI146277589 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAA TTTTCACCAT CGCGGACCGT CTTGCCGGCC TCCTGGTCGC GGTCGCCACG 
GTCATGCTGG CAGCCCTGAT CTGCGTCAGC CTCTACGAGG TCTTTGCGCG CTACGTCCTG
GCGGCGCCGA CGGTCTGGGC CTTCGACATG GTGAACTTCA CCAACGGGGC GCTGTTCGTG
CTCGGCGCGG CCTATGCGCA GCGCGAGCGG CTGCATGTCT CGATCGACAT CCTGTCGGGA
CGGCTTCCGC GGCGGCTGGG AGCGGCGATC CTCGGCGCGC TCTTCCTGCT GGCCGTGCTG
CCGACCATCG GGCTTCTCGC CTGGGAGGCG ACGCACCGGC TGATCGGCTT CTGGCAGAGC
GGGCGCGTGG TGGAATCCGC CTGGCACCCG CCGCGCTGGC CCTTCTACGT CCCGATCGCG
TTCGGCCTCT GGGCGCTCTG GCTGCAGTGC CTCGCCACCT GCCTGCGTCT CGGCCTGCAG
GTCGCCCGTC CGGCCTGA
 
Protein sequence
MTGIFTIADR LAGLLVAVAT VMLAALICVS LYEVFARYVL AAPTVWAFDM VNFTNGALFV 
LGAAYAQRER LHVSIDILSG RLPRRLGAAI LGALFLLAVL PTIGLLAWEA THRLIGFWQS
GRVVESAWHP PRWPFYVPIA FGLWALWLQC LATCLRLGLQ VARPA