| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1484 |
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| Symbol | ispF |
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| ID | 5083945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1513413 |
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| End bp | 1513892 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640483041 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001167683 |
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| Protein GI | 146277524 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.59213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC GCACCGGCAA TGGCTTTGAC GTGCACGCCT TCGGCCCCGG CGACCATGTG
TGGCTCTGCG GGGTGCGCGT GCCGCATCAC CGTGGCCTGA TCGGCCATTC GGACGCCGAT
GTGGGGATGC ACGCGCTCAC CGATGCGATC TATGGCGCGC TGGCCGAGGG CGACATCGGC
GTTCATTTCC CGCCTTCGGA TCCGCAATGG AAAGGCGCCG CCTCGCGCAT CTTCCTCGAA
CATGCGATGG GCCGGATCGC GGCCCGCGGC TTCACGCTGG CCAACTGCGA CGTGACGCTG
ATCTGCGAGC GCCCGAAGAT CGGCCCGATG GCTCCCGCCA TGCGCGAGGC CCTCGCCGCG
ATCATGGGGG TCGAGGTGGG CCGGATCTCG GTCAAGGCCA CCACCTCGGA AAAGCTGGGC
TTCACGGGCC GCGAGGAAGG CATTGCCTGC ATCGCCACCG CCACGCTCCT GCAGGCATGA
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| Protein sequence | MDIRTGNGFD VHAFGPGDHV WLCGVRVPHH RGLIGHSDAD VGMHALTDAI YGALAEGDIG
VHFPPSDPQW KGAASRIFLE HAMGRIAARG FTLANCDVTL ICERPKIGPM APAMREALAA
IMGVEVGRIS VKATTSEKLG FTGREEGIAC IATATLLQA
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