Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1246 |
Symbol | nifH |
ID | 5084419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1287119 |
End bp | 1288057 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640482804 |
Product | nitrogenase reductase |
Protein accession | YP_001167452 |
Protein GI | 146277293 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.944984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAC CGGCGGGCAC CGCCGCCTTC ACCAGAGACA CCCTTTCGAA GAAGGACATG AACATGGGAA AACTCCGGCA GATCGCATTC TACGGCAAGG GCGGGATCGG CAAGTCGACG ACCTCGCAGA ACACGCTCGC GGCGCTGGTC GAGATGGGTC AGAAGATCCT CATCGTCGGC TGCGACCCCA AGGCTGACTC CACCCGCCTG ATCCTGAACA CCAAGCTCCA GGACACCGTG CTGCATCTGG CGGCCGAAGC GGGCTCCGTC GAGGATCTGG AACTCGAGGA TGTGGTCAAG ATCGGCTACA AGGGCATCAA ATGCACCGAG GCCGGTGGCC CCGAGCCGGG CGTCGGCTGC GCCGGCCGCG GCGTGATCAC CGCCATCAAC TTCCTGGAAG AGAACGGCGC CTATGACGAC GTGGACTATG TGTCCTACGA CGTTCTGGGC GACGTGGTCT GCGGCGGCTT CGCCATGCCG ATCCGCGAGA ACAAGGCCCA GGAAATCTAC ATCGTCATGT CGGGCGAGAT GATGGCGCTC TACGCCGCCA ACAACATCGC CAAGGGCATC CTGAAATACG CCAACTCGGG CGGTGTCCGC CTCGGCGGCC TGATCTGCAA CGAGCGCAAG ACCGACCGCG AACTGGAACT GGCCGAGGCG CTGGCCGCCA AGCTCGGCTG CAAGATGATC CACTTCGTCC CGCGCGACAA TATCGTGCAG CACGCCGAAC TCCGCCGCGA GACGGTGATC CAGTATGCGC CCGAGAGCAA GCAGGCCAAC GAATACCGCG AACTGGCCCG CAAGATCCAC GAGAACTCGG GCAAGGGCGT GATCCCGACC CCGATCACCA TGGAAGAGCT GGAAGAGATG CTGATGGATT TCGGCATCAT GCAGTCCGAG GAAGACCGGC TCGCCGCCAT CGCCGCCGCC GAGGCCTGA
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Protein sequence | MSRPAGTAAF TRDTLSKKDM NMGKLRQIAF YGKGGIGKST TSQNTLAALV EMGQKILIVG CDPKADSTRL ILNTKLQDTV LHLAAEAGSV EDLELEDVVK IGYKGIKCTE AGGPEPGVGC AGRGVITAIN FLEENGAYDD VDYVSYDVLG DVVCGGFAMP IRENKAQEIY IVMSGEMMAL YAANNIAKGI LKYANSGGVR LGGLICNERK TDRELELAEA LAAKLGCKMI HFVPRDNIVQ HAELRRETVI QYAPESKQAN EYRELARKIH ENSGKGVIPT PITMEELEEM LMDFGIMQSE EDRLAAIAAA EA
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