Gene Rsph17025_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1236 
Symbol 
ID5084409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand- 
Start bp1277395 
End bp1278048 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content74% 
IMG OID640482794 
ProductdTMP kinase 
Protein accessionYP_001167442 
Protein GI146277283 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.97692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC AGGGCGGGCT CTTTCTGGCG GTCGAGGGGA TCGACGGCTC CGGCAAGTCG 
GGCATCGTGC AGCATCTTGC GGCGCGTCTG AGGGCGCACG GCCGCGAGGT GGTCGTCACG 
CGCGAGCCCG GCGGCACGCC CGAGGGCGAG GCTATCCGCG GCCTCGTCCT GGCGGGCGCC 
GACGAGGCGT GGGATCCGAT GGCCGAGCTT CTGCTGATGA CGGCGGCGCG GGTGCAGCAT 
GTCCGGCGCG TGATCGCCCC GGCGCTCGAG GCGGGAAGCG TCGTGCTGTC CGACCGCTAC 
GCCGGATCGA CTCTGGCCTA TCAGGGCACC GGCCGCGGCC TGTCCGAAAG CTTCATCCGC 
GCGCTTCATG CGGAAGCGAC CGGCGATCTC TGGCCCGATC TCACGCTGAT CCTCGATCTG 
GACGCCGCAA CCGGCCTCGC CCGCAGCCGC CGCCGCCTGA CCGGCTCCGC CATCGACGAG 
GGCCGGTTCG AGAGCCTCGA CCTCGCCTTT CACGAGCGCA TCCGCCAGTC GTTCCGGGCG 
CAGGCCGCGC GCGACCCCGC GCGTCACGCC GTCATCGACG CCTCGGGCAC GCCCGAGCAG 
GTGCAGGCCC GCGCCCTTGC GGCGCTGGAG CCGGTGCTCG CCGCCGCGCG CTGA
 
Protein sequence
MRAQGGLFLA VEGIDGSGKS GIVQHLAARL RAHGREVVVT REPGGTPEGE AIRGLVLAGA 
DEAWDPMAEL LLMTAARVQH VRRVIAPALE AGSVVLSDRY AGSTLAYQGT GRGLSESFIR 
ALHAEATGDL WPDLTLILDL DAATGLARSR RRLTGSAIDE GRFESLDLAF HERIRQSFRA 
QAARDPARHA VIDASGTPEQ VQARALAALE PVLAAAR