Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1115 |
Symbol | |
ID | 5084547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1139754 |
End bp | 1140503 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640482673 |
Product | hypothetical protein |
Protein accession | YP_001167321 |
Protein GI | 146277162 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0428943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATCCT CCAAGTCCCG CTCGCGTTCG AAATCGAACC GCCCGCGCAG CCTCGGCAAT ATCGTCAACC GCGTGTTTGA CAGCTCCGGA CCGGAGGGCA AGGTGCGGGG CACGCCGGCG CAGATCATCG AGAAATATCT GTTCCTCGCC CGCGACGCCC AGCTGTCCAA CGACCGGGTG GCGGCCGAGA ACTTCCTGCA GCATGCCGAA CATTATACCC GCCTTCTGGG CGAGGCGCAG CGCGAGCTGG CCGCCGAGCA GGAGAACCGC AGGTCCGAGC ATCAGCAGAG CCAGACCAAC CAGGGCCAGG GCGGCCAGCC CCAGCAGGGC AACCACCGCC ACGACCGGCC GCGCGACGAG CGCCGCGACG ACCGGCAGGA CCAGCCCCGT CCCGAGCGCG AGCCGCGCCC CGAGGCCCAG CCCCAGCCGC AACCGGCCGA GGCGCCCGCC AGCTCGCATG CGGTGATCGA CCTCTCCGAG AATGCCGAGG AAGAGACCGG CCTCGTCGAG ACGCCCGAGG CGCGCCCGCG GCACCGCCCG GCCCCGCGCC GCCGGTCCGA GCCGTCCGAT CCGCCGGCCC CCCAGGCCGA AAGCCCGTCC GAGCCGGCCG CCGAGAAGAC CCCCGACGCA TCGAACACCG AGCCCAAGGC CGACCGTCCG CGTCGGCCGC GCGGCCCCCG CAAGCCGAAG GCTCGCGAGG ATGGCGATGG CTCGCCCGAC GGCGACGGGC CACGCGAAGC CGCGGAATGA
|
Protein sequence | MRSSKSRSRS KSNRPRSLGN IVNRVFDSSG PEGKVRGTPA QIIEKYLFLA RDAQLSNDRV AAENFLQHAE HYTRLLGEAQ RELAAEQENR RSEHQQSQTN QGQGGQPQQG NHRHDRPRDE RRDDRQDQPR PEREPRPEAQ PQPQPAEAPA SSHAVIDLSE NAEEETGLVE TPEARPRHRP APRRRSEPSD PPAPQAESPS EPAAEKTPDA SNTEPKADRP RRPRGPRKPK AREDGDGSPD GDGPREAAE
|
| |