Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1099 |
Symbol | |
ID | 5084702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1124255 |
End bp | 1124848 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640482657 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_001167305 |
Protein GI | 146277146 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0641304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTG AGCGGTTCCT CTTTGCGGGG CTGATGTCGG CGGGCCTTGC GGTGCTCGGC GGCTACGGCC TGTCGCAGTC GGCCGTCTTC GCGCAGGACG CCGAGGATGG CCCCGGCCCG AACCTCGTGA TCGAGGTCTC GGGGCAGGCG CAGGGCGAGG TGGTCATCGA CCTCCTGCCC GAGGTGGCGC CGCAGCATGT CGAGCGCATG GTCACGCTGG CGAAGGAGAG CGCCTATGAC GGCGTGGTCT TTCATCGCGT GATCGAGGGC TTCATGGCGC AGACGGGCGA TGTCGAGTTC GGCAAGGGTG ACTCGCTGCG CCGCGCGGGA ACGGGCGGGT CGAGCTATCC CGACCTGCCG GCCGAGTTCT CGGACGTGCC CTTCGCGCGC GGCGTGGTGG GGATGGCCCG CTCGGCCAAT CCGAACTCGG CGAACTCGCA GTTCTTCATC ATGTTCGCCC CCGGCGACTT CCTGAACGGT CAATACACGG TCGTGGGGCG GGTCGTTCAG GGCATGGATG TGGTGGACGC GATCACCCGC GGCGAGCCTC CGCGCACGCC CGACGTGATG ACGAAGGTCT CGGTGGCCGA GTAG
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Protein sequence | MSSERFLFAG LMSAGLAVLG GYGLSQSAVF AQDAEDGPGP NLVIEVSGQA QGEVVIDLLP EVAPQHVERM VTLAKESAYD GVVFHRVIEG FMAQTGDVEF GKGDSLRRAG TGGSSYPDLP AEFSDVPFAR GVVGMARSAN PNSANSQFFI MFAPGDFLNG QYTVVGRVVQ GMDVVDAITR GEPPRTPDVM TKVSVAE
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