Gene Rsph17025_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1035 
Symbol 
ID5084652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1061277 
End bp1062911 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content69% 
IMG OID640482592 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_001167241 
Protein GI146277082 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAC CTTCCCCGCT TGAGGTGTCC ATGTCGTCTC CCCACCGTCA TAAGGCCGGA 
TTCGGGCTTG CCCTTTGCCT CGCCGCCTTC CTCGGGACGG GCGCTCTGGC GAATCCTTCG
GCGCCGGCGC TGACACCCTT CACCCGCTCG GTGGCCGAGG CCGCGGGGCG GAGCGACGTG
ATCTCGGCCT TCTATGCCGG GCGGTCCTAT CGCCCGCTCT GGACCGGGCC CGAGGATGCG
GAGCGTCGGC AGGCGTTCCT GTCGGCCATA GCGCAGGCCT CCGCCCACGG TCTGCCGGTG
CAGCGCTATG ATGCGGCGGA GCTGGCCGCC CGCTTCCGCG CCGCCCGGAC CGAGGCCGAC
CGGGGGCGCG TCGAGGTGGC GATGACGCGG GCGCTTCTGG CCTGGGCCCA CGACCTGCGC
GGGGGCGTGC TCGAGCCCGG CAAGGTCGAT CCGGGCATCA AGCGCGAGGT GCAGCGCCTC
GATCCGCGTT CGGTGCTGAC GGCCTTCGAG GCGGATCCCC GACCGTTCCT GAACGGCCTT
GCCCCGCGCA CGCCCGAGTA TGCGCGTCTG ATGCGGGCCC GAATGGAGCT GGAGGCCCGG
ATCGCGGCCG GCGGATGGGG CCTGCAGGTT CCGGCCGGGA AGCTGCGCCC CGGCGCCACG
GGCGAGGGCG TTCTGGCGCT GCGCAACCGG CTGATGGTCA TGGGCTACCT CGGCCGCAGC
ACGGTGGCGA GCTATGACGC TTCGATCGAG GCGGCGGTGC GGGCCTTCCA GATCGACCAC
GGGCTCACGC CCGACGGTGT CGTGGGTGAG GGTACGCTGG CCGCGATGAA CGTGTCGCCC
GAGACGCGGC TGGAATCGGT TCTCGTGGCG CTGGAGCGCG AGCGCTGGCT GGCCATCGAC
CGGGGCGAGC GGCACATCTG GGTGAACCTC ACCGATTTCA GCGCCCGCAT CGTCGAGGGC
GGCAAGGTGA CGTTCGAGAC CCGCTCGGTG ATCGGCAAGG ACAGTCCCGA CCAGCGCAGC
CCCGAGTTTT CGGACGAGAT GGAATATATG GTGATCAACC CGTCGTGGCA TGTGCCGCGT
TCGATCACCA CCAAGGAATA TCTGCCGCTG CTGCAGCGCA ATCCGAACGC CGCCGCCCAT
CTGAAGCTGA TCGACAGCCG CGGACAGGTG GTCAATCGCG GCTCGGTCAA CTTCAACGCC
TACAATGCGC GCAACTTTCC CTATTCGATG CGGCAGCCGC CCTCGGACGG AAATGCGCTG
GGGCTGGTCA AGTTCATGTT CCCGAACCCC TGGAACATCT ACCTGCACGA CACGCCCTCG
AAGTCGCTGT TCGACCGCGA GGTCCGGGCC TTCTCGCACG GCTGCATCCG TCTGGCGCAG
CCCTTCGACT TCGCCTATGC CCTGCTGGCC CGGCAGTCCG ACGATCCAGA GGGGCTGTTC
CAGTCCCATC TGAGGACCGG CAAGGAGACG GTGGTGCGGC TGGAAGAGCC GGTGCCGGTG
CATCTGGTCT ATTCCACCGC CTGGGCGGGG CCGACCGGGC GGATGAGCTA TCGGCAGGAC
ATCTACGGTC GCGATGGCGT GATCTTGGAG GCGCTGCGCG CCGCCGGGGT GGTGCCGGGC
GCGGTTCAGG GCTAG
 
Protein sequence
MRRPSPLEVS MSSPHRHKAG FGLALCLAAF LGTGALANPS APALTPFTRS VAEAAGRSDV 
ISAFYAGRSY RPLWTGPEDA ERRQAFLSAI AQASAHGLPV QRYDAAELAA RFRAARTEAD
RGRVEVAMTR ALLAWAHDLR GGVLEPGKVD PGIKREVQRL DPRSVLTAFE ADPRPFLNGL
APRTPEYARL MRARMELEAR IAAGGWGLQV PAGKLRPGAT GEGVLALRNR LMVMGYLGRS
TVASYDASIE AAVRAFQIDH GLTPDGVVGE GTLAAMNVSP ETRLESVLVA LERERWLAID
RGERHIWVNL TDFSARIVEG GKVTFETRSV IGKDSPDQRS PEFSDEMEYM VINPSWHVPR
SITTKEYLPL LQRNPNAAAH LKLIDSRGQV VNRGSVNFNA YNARNFPYSM RQPPSDGNAL
GLVKFMFPNP WNIYLHDTPS KSLFDREVRA FSHGCIRLAQ PFDFAYALLA RQSDDPEGLF
QSHLRTGKET VVRLEEPVPV HLVYSTAWAG PTGRMSYRQD IYGRDGVILE ALRAAGVVPG
AVQG