Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1035 |
Symbol | |
ID | 5084652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1061277 |
End bp | 1062911 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482592 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001167241 |
Protein GI | 146277082 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGAC CTTCCCCGCT TGAGGTGTCC ATGTCGTCTC CCCACCGTCA TAAGGCCGGA TTCGGGCTTG CCCTTTGCCT CGCCGCCTTC CTCGGGACGG GCGCTCTGGC GAATCCTTCG GCGCCGGCGC TGACACCCTT CACCCGCTCG GTGGCCGAGG CCGCGGGGCG GAGCGACGTG ATCTCGGCCT TCTATGCCGG GCGGTCCTAT CGCCCGCTCT GGACCGGGCC CGAGGATGCG GAGCGTCGGC AGGCGTTCCT GTCGGCCATA GCGCAGGCCT CCGCCCACGG TCTGCCGGTG CAGCGCTATG ATGCGGCGGA GCTGGCCGCC CGCTTCCGCG CCGCCCGGAC CGAGGCCGAC CGGGGGCGCG TCGAGGTGGC GATGACGCGG GCGCTTCTGG CCTGGGCCCA CGACCTGCGC GGGGGCGTGC TCGAGCCCGG CAAGGTCGAT CCGGGCATCA AGCGCGAGGT GCAGCGCCTC GATCCGCGTT CGGTGCTGAC GGCCTTCGAG GCGGATCCCC GACCGTTCCT GAACGGCCTT GCCCCGCGCA CGCCCGAGTA TGCGCGTCTG ATGCGGGCCC GAATGGAGCT GGAGGCCCGG ATCGCGGCCG GCGGATGGGG CCTGCAGGTT CCGGCCGGGA AGCTGCGCCC CGGCGCCACG GGCGAGGGCG TTCTGGCGCT GCGCAACCGG CTGATGGTCA TGGGCTACCT CGGCCGCAGC ACGGTGGCGA GCTATGACGC TTCGATCGAG GCGGCGGTGC GGGCCTTCCA GATCGACCAC GGGCTCACGC CCGACGGTGT CGTGGGTGAG GGTACGCTGG CCGCGATGAA CGTGTCGCCC GAGACGCGGC TGGAATCGGT TCTCGTGGCG CTGGAGCGCG AGCGCTGGCT GGCCATCGAC CGGGGCGAGC GGCACATCTG GGTGAACCTC ACCGATTTCA GCGCCCGCAT CGTCGAGGGC GGCAAGGTGA CGTTCGAGAC CCGCTCGGTG ATCGGCAAGG ACAGTCCCGA CCAGCGCAGC CCCGAGTTTT CGGACGAGAT GGAATATATG GTGATCAACC CGTCGTGGCA TGTGCCGCGT TCGATCACCA CCAAGGAATA TCTGCCGCTG CTGCAGCGCA ATCCGAACGC CGCCGCCCAT CTGAAGCTGA TCGACAGCCG CGGACAGGTG GTCAATCGCG GCTCGGTCAA CTTCAACGCC TACAATGCGC GCAACTTTCC CTATTCGATG CGGCAGCCGC CCTCGGACGG AAATGCGCTG GGGCTGGTCA AGTTCATGTT CCCGAACCCC TGGAACATCT ACCTGCACGA CACGCCCTCG AAGTCGCTGT TCGACCGCGA GGTCCGGGCC TTCTCGCACG GCTGCATCCG TCTGGCGCAG CCCTTCGACT TCGCCTATGC CCTGCTGGCC CGGCAGTCCG ACGATCCAGA GGGGCTGTTC CAGTCCCATC TGAGGACCGG CAAGGAGACG GTGGTGCGGC TGGAAGAGCC GGTGCCGGTG CATCTGGTCT ATTCCACCGC CTGGGCGGGG CCGACCGGGC GGATGAGCTA TCGGCAGGAC ATCTACGGTC GCGATGGCGT GATCTTGGAG GCGCTGCGCG CCGCCGGGGT GGTGCCGGGC GCGGTTCAGG GCTAG
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Protein sequence | MRRPSPLEVS MSSPHRHKAG FGLALCLAAF LGTGALANPS APALTPFTRS VAEAAGRSDV ISAFYAGRSY RPLWTGPEDA ERRQAFLSAI AQASAHGLPV QRYDAAELAA RFRAARTEAD RGRVEVAMTR ALLAWAHDLR GGVLEPGKVD PGIKREVQRL DPRSVLTAFE ADPRPFLNGL APRTPEYARL MRARMELEAR IAAGGWGLQV PAGKLRPGAT GEGVLALRNR LMVMGYLGRS TVASYDASIE AAVRAFQIDH GLTPDGVVGE GTLAAMNVSP ETRLESVLVA LERERWLAID RGERHIWVNL TDFSARIVEG GKVTFETRSV IGKDSPDQRS PEFSDEMEYM VINPSWHVPR SITTKEYLPL LQRNPNAAAH LKLIDSRGQV VNRGSVNFNA YNARNFPYSM RQPPSDGNAL GLVKFMFPNP WNIYLHDTPS KSLFDREVRA FSHGCIRLAQ PFDFAYALLA RQSDDPEGLF QSHLRTGKET VVRLEEPVPV HLVYSTAWAG PTGRMSYRQD IYGRDGVILE ALRAAGVVPG AVQG
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