| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0933 |
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| Symbol | |
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| ID | 5085001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 953223 |
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| End bp | 956942 |
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| Gene Length | 3720 bp |
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| Protein Length | 1239 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482491 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001167140 |
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| Protein GI | 146276981 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0421297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGTGGC GGGCTGCTGG ATCAACGACG GGGCCAAGCC CCGCGAGGGA CGAGAACGGA
GAGGGCGAGA TGAAGATCGA GCGGAAGTTC ACCACGGCTG AAGGCGGCGC CTATGGCGAC
ATCGGCTTCA CGACCATGGT TTCGGAGATC CGGAACCCGG ACGGCACCGT GGTCTTCCGC
AACGAGAGCG TCGAGGTGCC GGAGGGCTGG AGCCAGGTGG CCTCGGACGT GCTCGCCCAG
AAATACTTCC GCAAGGCCGG CGTGCCCGCA CGCCTGCGCC GCGTGAAGGA GAAGGGGGTT
CCGGACTTCC TGTGGCGCTC GGTTCCCGAC GAGGCGGCGC TGGCGGCGCT GCCCGAGGAC
GAGCGCTTCG TCGGCGAGAC CTCGGCCCGG CAGGTCTTCG ACCGGCTGGC CGGCGCCTGG
GCCTACTGGG GCTGGAAGGG CGGCTATTTC TCCTCCGAGT CCGATGCCCG CGCCTATTAC
GACGAGATGC GCCACATGCT GGCCCGCCAG ATGGCGGCGC CGAACAGCCC GCAGTGGTTC
AACACCGGCC TGCACTGGGC CTATGGCATC GACGGCCCGT CGCAGGGTCA CTTCTACGTC
GATCACGCCA CGGGCAAGCT GGTGAAATCC GACAGCGCCT ATGAGCATCC CCAGCCGCAT
GCCTGCTTCA TCCAGTCGGT CGCGGATGAT CTGGTGAACG AGGGCGGGAT CATGGACCTC
TGGGTCCGCG AGGCGCGGCT GTTCAAGTAT GGCTCGGGCA CCGGCACCAA CTTCTCGAGC
TTGCGCGGCG AGGGCGAGAA ACTGTCGGGC GGCGGCAAGT CCTCGGGGCT CATGGGTTTC
CTGAAGATCG GCGACCGCGC AGCCGGCGCG ATCAAGTCGG GCGGCACGAC CCGGCGCGCG
GCCAAGATGG TGATCTGCGA CATGGATCAC CCCGACATCG AGCAGTTCAT CAACTGGAAG
GTCATCGAAG AGCAGAAGGT CGCCTCTCTC GTTGCCGGTT CGAAGCAGCA TGAAGCGAAG
CTGAACGACA TCTTCGCCGC CATCCGCAGC TTCGACGGCT CGATCGAGGG CGCGACCGAC
CCGGCCGGAA ACGCAGGCCT CAAGACCGCT ATCCGTGCCG CGAAAAAGGC CATGATCCCC
GAGACCTACA TCAACCGCGT GCTGCAGTAT GCGCGGCAGG GCTTCTCGTC GATCGAGTTT
CCGACTTACG ATACGGATTG GGACTCCGAG GCCTACATCA CCGTCTCGGG CCAGAACTCG
AACAACTCCG TCCGCGTGAC GGATGCCTTC CTGCGGGCGG TGAAGGAGGA TGCCGACTGG
GCGCTTCTGC GCCGCACCGA CGGCAAGGTC GCCAAGACCG TGAAGGCGCG CGAACTGTGG
GATCAGGTGG GCCATGCCGC CTGGGCCTGC GCCGATCCCG GCATCCAGTT CCACGACACG
GTGAACGCCT GGCACACCTG CCCCGAGGAC GGGCCGATCC GCGGATCGAA CCCCTGTTCG
GAATACATGT TCCTCGACGA CACGGCCTGC AACCTGGCGT CGATGAACCT GCTCACGTTC
TTCGAGGGCG GCCGCTTTGA CGCCGATGCG TATATCCATG CCACGCGGCT CTGGACGCTG
ACGCTGGAAG TCTCGGTGAT GATGGCGCAG TTCCCGTCGA AGGAAATCGC GCAGCTGTCC
TTCGACTTCC GCACGCTGGG CCTTGGCTAT GCCAACATCG GCGGGCTCCT GATGAACATG
GGGCTGGGCT ATGACTCGAA GGAGGGCAGG GCGCTCTGCG GCGCGCTCTC GGCGATCATG
ACCGGCGTGG CCTATGCCAC CTCGGCGGAG ATGGCGGCCG AGCTTGGCGC CTTCGCGGGC
TACCAGCGCA ACGCCCAGCA CATGCTCCGC GTCATCCGCA ACCACCGCGC CGCGGCGCAT
GGTGCTACAA GCTACGAAGC GGTGAACGTG GCCCCCGTGC CGCTCGATGC CGCCAACTGC
CCGGACGCGC GTCTGGTCAG TCTCGCGAAA TCCGCCTGGG ACGAGGCGCT GGCGCTGGGC
GAGGCCCACG GCTACCGCAA CGCGCAGGTG ACGGTGATCG CGCCCACCGG CACCATCGGC
CTCGTGATGG ATTGCGACAC GACCGGGATC GAGCCCGACT TCGCGCTGGT CAAGTTCAAG
AAGCTCGCCG GCGGCGGCTA TTTCAAGATC ATCAACCAGT CGGTTCCGGC CGCGCTGGAG
ACCCTTGGCT ACAGTTCCGC CCAGATCTCG CAGATCGTGG CCTATGCGGT GGGCCACGGC
ACGCTGGCCA ACTGCCCCGC GATCAGCCAT GCCGCGCTTG TCGGCCACGG CTTCGGCGCC
GCGGAGCTCG AGAAGGTCGA GGCGGCGCTG CCGTCGGCCT TCGACATCCG CTTCGTCTTC
AACCAGTGGA CGCTGGGCGA AGACTTCTGC AAGCGCGCGC TCGGCATCCC GGCCGACAAG
CTCGCCGACC CGACCTTCGA CCTGCTGCGT CACCTCGGCT TCACCAAGGC CCAGATCGAC
GCCGCGAACG ACCATGTCTG CGGGACGATG ACGCTGGAAG GTGCGCCGCA CCTGAAGGCC
GAGCATCTGC CGGTCTTCGA CTGCGCCAAC CCCTGCGGCA AGAAGGGCCG CCGCTACCTC
TCGGTCGAGA GCCACATCCA CATGATGGCG GCGGCGCAAA GCTTCATCTC GGGCGCGATC
TCGAAGACGA TCAACATGCC GAACTCGGCG ACCATCGCCG AGGTGCTGGC GGCCTATGAG
CTGTCGCATT CGCTGGGCAT CAAGGCCAAC GCCCTCTACC GCGACGGCTC CAAGCTGTCG
CAGCCCCTCG CCTCGGCGCT GGTCGAGGAT GACGAGGAGG CCGAGGAGAT CCTCGCCACC
GGCACGCCGC AGGAGAAGGC GATCGTGATC GCCGAGAAGA TCGTCGAGAA GGTGATCGTC
AAGGAGATCG TCCGCTCGAA CCGCGAGAAG CTGCCCGAGC GGCGCAAGGG CTACACGCAA
AAGGCGATCG TCGGCGGCCA CAAGGTCTAT CTGCGCACCG GCGAATACAA GGACGGCTCG
CTTGGCGAGA TCTTCATCGA CATGCACAAG GAAGGCGCGG GCTTCCGGGC GATGATGAAC
AACTTCGCCA TCGCGGTGTC GGTCGGCCTG CAATACGGCG TGCCGCTGGA AGAATTCGTC
GACGCCTTCA CCTTCACCAA GTTCGAGCCC GCGGGCATGG TGCAGGGCAA CGACTCGATC
AAGAACGCGA CCTCGATCCT CGACTACATC TTCCGCGAAC TGGCGATTTC CTACCTCGAC
CGCACCGACC TTGCGCATGT CAAACCGCAG GGCGCGAGCT TCGACGATCT CGGCGGCGGC
ACGGACGAGG GCAAGCGCTC GAACGTGACC GAGGTCTCCG AGGCCGCCGC CTCGCGCAGC
CTCGAGGTGC TCAAGCAGAT CAGTTCGACC GGCTACCTGC GCAAGCGCCT GCCGCAGGAA
CTGACGGTGC TTCAGGGCGG CATGGCCGTG GGCTTCGAGT CCGCCTCGCT GACCGGCTTC
GCCGAAACGC GCGCCGCGAC GGCCCTCGCC TCCGGCACGG TCGCGATGGA CGCGCGGGCG
AAGGCCAAGA TGCAGGGCTA CGAGGGCGAT CCCTGCGGCG AGTGCGGCAA CTACACGCTG
GTGCGCAACG GCACCTGCAT GAAGTGCAAC ACCTGCGGTG CAACGAGCGG CTGCAGCTGA
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| Protein sequence | MLWRAAGSTT GPSPARDENG EGEMKIERKF TTAEGGAYGD IGFTTMVSEI RNPDGTVVFR
NESVEVPEGW SQVASDVLAQ KYFRKAGVPA RLRRVKEKGV PDFLWRSVPD EAALAALPED
ERFVGETSAR QVFDRLAGAW AYWGWKGGYF SSESDARAYY DEMRHMLARQ MAAPNSPQWF
NTGLHWAYGI DGPSQGHFYV DHATGKLVKS DSAYEHPQPH ACFIQSVADD LVNEGGIMDL
WVREARLFKY GSGTGTNFSS LRGEGEKLSG GGKSSGLMGF LKIGDRAAGA IKSGGTTRRA
AKMVICDMDH PDIEQFINWK VIEEQKVASL VAGSKQHEAK LNDIFAAIRS FDGSIEGATD
PAGNAGLKTA IRAAKKAMIP ETYINRVLQY ARQGFSSIEF PTYDTDWDSE AYITVSGQNS
NNSVRVTDAF LRAVKEDADW ALLRRTDGKV AKTVKARELW DQVGHAAWAC ADPGIQFHDT
VNAWHTCPED GPIRGSNPCS EYMFLDDTAC NLASMNLLTF FEGGRFDADA YIHATRLWTL
TLEVSVMMAQ FPSKEIAQLS FDFRTLGLGY ANIGGLLMNM GLGYDSKEGR ALCGALSAIM
TGVAYATSAE MAAELGAFAG YQRNAQHMLR VIRNHRAAAH GATSYEAVNV APVPLDAANC
PDARLVSLAK SAWDEALALG EAHGYRNAQV TVIAPTGTIG LVMDCDTTGI EPDFALVKFK
KLAGGGYFKI INQSVPAALE TLGYSSAQIS QIVAYAVGHG TLANCPAISH AALVGHGFGA
AELEKVEAAL PSAFDIRFVF NQWTLGEDFC KRALGIPADK LADPTFDLLR HLGFTKAQID
AANDHVCGTM TLEGAPHLKA EHLPVFDCAN PCGKKGRRYL SVESHIHMMA AAQSFISGAI
SKTINMPNSA TIAEVLAAYE LSHSLGIKAN ALYRDGSKLS QPLASALVED DEEAEEILAT
GTPQEKAIVI AEKIVEKVIV KEIVRSNREK LPERRKGYTQ KAIVGGHKVY LRTGEYKDGS
LGEIFIDMHK EGAGFRAMMN NFAIAVSVGL QYGVPLEEFV DAFTFTKFEP AGMVQGNDSI
KNATSILDYI FRELAISYLD RTDLAHVKPQ GASFDDLGGG TDEGKRSNVT EVSEAAASRS
LEVLKQISST GYLRKRLPQE LTVLQGGMAV GFESASLTGF AETRAATALA SGTVAMDARA
KAKMQGYEGD PCGECGNYTL VRNGTCMKCN TCGATSGCS
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