Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0754 |
Symbol | |
ID | 5083518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 764290 |
End bp | 766116 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640482312 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_001166965 |
Protein GI | 146276806 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.633954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATCC CGACACCTAC AAGTGACCTC GCGCCCGCAG CGGCGGGCTT GCCGGACGTG GGGCTGCTGA CGGCACTGGC CAACCAGTTC TTCGCCGCCC TGCCGGGGAC CACGGCACCG CTTTCGGCCG GCGGACCCTT TGCCCATCCG ATGCCGAACG CCCCCCTGCC CCCAGGCCTT GCGCCCGGGC CGCTGGCGAA CGGGCCCATG CTGCCGGGGA CCCTTGCCCC CGGCGCGAAT ATCGTGCCGT CAACGCCCGA ACAGACGCTC GCCGGTATCG CCTCGGCACC CGCCCTTATC CCCCATTCGG CGGCGGTGAA CGGGCTGCCG GATCATGCGG CCATCGTGCC GCCTGCCGTG AATGGCCGGT TCGGGGGGCA TTCGTTGGCT GTGCCGCAGG CGGTGCGGCC GCCCGCCCCC GCGCAACGCC CGCCGCGCGA GGATCGGGTT ACCGCACGCA GCCACGGTCT TCCTAGCGAG GACGACCTGC GTGCGCTGCT GGCAGGCGGC CCTGTAGCCC CTGCCCTGCC GACGGCACAC GCTCCGACCG AGCCCACGTT CTACTTCGTT CCAGCACGGC CTGCGGTGCC GCAAGTGCCC GCCTCAGGTC ATCCGGCCTT CGACGTTCAT GCGGTGCGGC GCGACTTCCC GATCCTGCAA GAGCGCGTGA ACGGCCGGCC GCTGGTCTGG TTCGACAACG CCGCGACCAC GCAAAAGCCG CTGGAGGTAC TGGATCGGCT GGACCGTTTC TACCGGCGCG AGAACTCGAA CATTCACCGC GCGGCGCATG AACTGGCCGG CCGCGCAACG GACGCCTACG AAAAGGCGCG CGAGACGGTG CGTGCCTTCC TTGGCGCCTC GTCCGCAGAG GAGATCATCT TCGTCCGCGG CGCGACGGAA GGGATCAACC TGATCGCCAG AACCTGGGGC GCGAAGAACA TCCATGACGG CGACGAGATC CTCGTCTCAC AGCTCGAACA CCACGCCAAC ATAGTGCCCT GGCAGCAACT GGCGCAGGAC AAGGGCGCGC GGCTGAAGGT GATCCCGGTT GATGACAGCG GTCAGGTGAT ACTCGAGGAA GCCCGGCGGC TGATTTCGAC CCGGACGAAG ATCGTGGCCG TGACGCAGGT GTCGAATGCG CTTGGCACCG TGGTGCCGGT GGTGGAGATC GTGGACCTCG CCCATCGCGC CGGTGCGGTG GCACTGGTCG ACGGCGCCCA ATCGGTCAGC CACATGCGGG TGGACGTGCA GGCAATCGGG GCGGATTTCT TCGTCTTCTC GGGCCACAAG GTGTTCGGCC CCACAGGCAT CGGCGCCGTC TACGGCCGGA AGGCGCTGCT CGACGACATG CCGCCCTGGC AGGGCGGAGG CAACATGATC GCCGACGTGA CCTTCGAGCG GACGGTGTTC CAGCCGCCAC CGCACCGGTT CGAGGCCGGC ACCGGAAACA TCGCGGACGC GGTGGGCCTT GGTGCCGCGC TGGACTATGT CGGCCGGATC GGGATCGAGA CGATCGCACG TTACGAACAC GACCTTCTGG CCTACGCCAC CCACCAGCTT GCGCCGATCA AGGGCGTGCG GCTGATCGGA ACCGCGCGCG ACAAGGCGTC GGTGTTGTCC TTTGTGCTGG AAGGGATGAA GCCAGAGGAG GTCGGCCGCG CGCTGAACGC GGAAGGCATC GCCGTCAGGT CGGGGCATCA TTGCGCCCAG CCGATCCTGC GCCGCTTCGG GCTGGAGGCG ACGGTGCGGC CGTCGCTGGC CTTCTACAAT ACCTGCGAAG AGGTGGATCG CTTCATCACG GTCGTCAGGC GTCTGGCGCG GGCCTGA
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Protein sequence | MTIPTPTSDL APAAAGLPDV GLLTALANQF FAALPGTTAP LSAGGPFAHP MPNAPLPPGL APGPLANGPM LPGTLAPGAN IVPSTPEQTL AGIASAPALI PHSAAVNGLP DHAAIVPPAV NGRFGGHSLA VPQAVRPPAP AQRPPREDRV TARSHGLPSE DDLRALLAGG PVAPALPTAH APTEPTFYFV PARPAVPQVP ASGHPAFDVH AVRRDFPILQ ERVNGRPLVW FDNAATTQKP LEVLDRLDRF YRRENSNIHR AAHELAGRAT DAYEKARETV RAFLGASSAE EIIFVRGATE GINLIARTWG AKNIHDGDEI LVSQLEHHAN IVPWQQLAQD KGARLKVIPV DDSGQVILEE ARRLISTRTK IVAVTQVSNA LGTVVPVVEI VDLAHRAGAV ALVDGAQSVS HMRVDVQAIG ADFFVFSGHK VFGPTGIGAV YGRKALLDDM PPWQGGGNMI ADVTFERTVF QPPPHRFEAG TGNIADAVGL GAALDYVGRI GIETIARYEH DLLAYATHQL APIKGVRLIG TARDKASVLS FVLEGMKPEE VGRALNAEGI AVRSGHHCAQ PILRRFGLEA TVRPSLAFYN TCEEVDRFIT VVRRLARA
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