Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0721 |
Symbol | fumC |
ID | 5084080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 730281 |
End bp | 731675 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640482279 |
Product | fumarate hydratase |
Protein accession | YP_001166932 |
Protein GI | 146276773 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.764225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAA CCCGCACCGA GACCGACAGC TTCGGCCCGC TCGAGGTTCC CGCCGACAAA TACTGGGGCG CGCAGACGCA GCGCTCGATC CAGAACTTCC CTATCGGCTG GGAGCGTCAG CCCGTCGCCA TCATCCGCGC GCTCGGCGTG GTCAAGAAGG CCTGCGCGCT GGTCAATGTC GATCAGGGCG ACATGCCCAA GGAACTGGGC GAGGCCATCG CCGCCGCCGC GACCGAGGTG ATCGAGGGCC GCTTCGACGA CAACTTCCCG CTGGTGGTCT GGCAGACCGG CTCGGGCACG CAGTCGAACA TGAACGCGAA CGAGGTGATC TCGAACCGCG CGATCGAGAT GCTGGGCGGC GTTATGGGCT CGAAGAAGCC CGTGCACCCG AACGACCATG TGAACATGGG GCAATCCTCG AACGACACTT TCCCCACCGC GATGCATGTC GCCATCGGCA TGATGGCGCG CGATGTGCTG CTGCCGGGGC TCGAGAAGCT GCATGCCGCG CTGCTGGCCA AGTCGGAAGA ATTCAAGGAC ATCATCAAGA TCGGCCGCAC CCACACGCAG GACGCGACGC CCCTGACGCT GGGCCAGGAG TTCTCAGGCT ATGCCAAGCA GGTGGAAAAA GGCATCGCTC GCGTGAAGGC CTGCCTGCCC GACATCTACG AACTGGCGCA GGGCGGCACC GCCGTCGGCA CCGGCCTGAA CACACGGCAA GGCTGGGACA GCCGCGTGGC GGGCAAGATC GCCGAGATCA CCGGCCTGCC CTTCGTCACC GCCGAAAACA AGTTCGAGGC GCTGGCCGCC CATGATGCGA TGGTGATGTT CTCGGGCGCG CTGAAGACGG TCGCGGCGTC GCTCTTCAAG ATCGCGAACG ACATGCGTCT GCTCGGCTCC GGCCCCCGCT CGGGGCTGGG CGAACTGATC CTGCCCGAGA ACGAGCCGGG CTCGTCGATC ATGCCAGGCA AGGTGAACCC GACACAGGCC GAGGCGCTGA CGATGGTCTG CGCCCATGTC ATGGGCAACG ACGCCGCCGT GGGCTTCGCC GGCAGCCAGG GCCATTTCGA GCTGAACGTC TACAACCCGA TGATGTCCTA CAACGTGCTG CAGTCGATGC AGCTTCTGGG CGATGCGGCG GGCAGCTTCA CCGACAACAT GGTGGTGGGC ACGCAGGCCA ACACCGCGCG GATCGACAAG CTGATGAAGG AAAGCCTGAT GCTGGTGACG GCGCTCGCCC CCACCATCGG CTACGACAAC GCGACCAAGG TCGCCAAGAC CGCGCACAAG AACGGCACCA CGCTGCGCGA AGAGGCGATT GCCCTCGGCT TCGTCGATGC CGAGACCTTC GACCGCATCG TGCGCCCCGA GGACATGATC GGGCCCAAGG GCTGA
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Protein sequence | MTATRTETDS FGPLEVPADK YWGAQTQRSI QNFPIGWERQ PVAIIRALGV VKKACALVNV DQGDMPKELG EAIAAAATEV IEGRFDDNFP LVVWQTGSGT QSNMNANEVI SNRAIEMLGG VMGSKKPVHP NDHVNMGQSS NDTFPTAMHV AIGMMARDVL LPGLEKLHAA LLAKSEEFKD IIKIGRTHTQ DATPLTLGQE FSGYAKQVEK GIARVKACLP DIYELAQGGT AVGTGLNTRQ GWDSRVAGKI AEITGLPFVT AENKFEALAA HDAMVMFSGA LKTVAASLFK IANDMRLLGS GPRSGLGELI LPENEPGSSI MPGKVNPTQA EALTMVCAHV MGNDAAVGFA GSQGHFELNV YNPMMSYNVL QSMQLLGDAA GSFTDNMVVG TQANTARIDK LMKESLMLVT ALAPTIGYDN ATKVAKTAHK NGTTLREEAI ALGFVDAETF DRIVRPEDMI GPKG
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