| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0657 |
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| Symbol | |
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| ID | 5083001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 659477 |
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| End bp | 660124 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640482214 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_001166868 |
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| Protein GI | 146276709 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.114356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCCG ATGGTTTCTC GCACGTCCGG GGCTGGGTCT TCGACCTCGA CAACACACTC
TATCCGCCCT CCGCCCGGCT CTTCGACCAG ATCGAGCGGC GCATGACCGA CTGGGTGATG
ACCGAGCTTC GGGTGGTGCG CGACGAGGCC GACCGGCTGC GGCGGCACTA CTGGCACCGC
TACGGCACCA CGCTCGCGGG CCTGATGGCC GAGCATGGCG TCGATCCGGG CCCCTATCTC
AGCCATGTCC ACGACATCTC GCTCGACCAT CTCGAGCGCG ACATGATCCT CGCGGCCCGC
ATCCGCGCCC TTCCGGGGCG CAAGATCGTC TATACCAACG GCTGCGCCCC CTATGCCGAG
CGCGTGCTCG AGGCGCGCGG CCTCGGCGGT CTCTTCGACG CCGTCTATGG GGTCGAGCAC
GCGGGCTTCC GGCCCAAGCC CGAGCGCGCC GCCTTCGAGA CCGTCTTTGC CGCTGACCGG
CTCAGCCCCG CCGCCGCGGC CATGTTCGAG GATGATTCGC GCAACCTCGT CGAGCCGCAT
GCGTTGGGGA TGCGCACGGT CCATGTCGCG CCCGAGGCGG TGCCGGCGCC CCACATCCAC
CACCACACGC TCGACCTGTC GGAGTTTCTG GCCCGGCTTC AGCCCTGA
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| Protein sequence | MVADGFSHVR GWVFDLDNTL YPPSARLFDQ IERRMTDWVM TELRVVRDEA DRLRRHYWHR
YGTTLAGLMA EHGVDPGPYL SHVHDISLDH LERDMILAAR IRALPGRKIV YTNGCAPYAE
RVLEARGLGG LFDAVYGVEH AGFRPKPERA AFETVFAADR LSPAAAAMFE DDSRNLVEPH
ALGMRTVHVA PEAVPAPHIH HHTLDLSEFL ARLQP
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