Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0638 |
Symbol | |
ID | 5082982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 637590 |
End bp | 638771 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482195 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_001166849 |
Protein GI | 146276690 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.121257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.711879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGG ACTGGAAGAC ACGGACGCAG CTCGTCCACG GGGGCAGCCG GCGGAGCCAG TATGGCGAGA TGGCCGAGGC GATCTTTCTC ACGCAGGGCT TCGTCTATGA CACGGCCGGG CAGGCCGAGG CCCGCTTCAT CGAGACGGGC GAGGACGAGT TCATCTACGC CCGCTACGGC AACCCCACCA CCCGCATGTT CGAAGAGCGC ATCGCAGCCG TCGAGGGCAC CGAGGATGCC TTTGCCACCG CCTCGGGCAT GGCGGCGATC CACGGCGTCC TGACCTCGAT CGTGCGGGCG GGCGATCATC TGGTGGCGGC GCGCGCGCTC TTCGGCTCGT GCATCTACAT CCTCGAGGAG GTGCTGGGCC GGTTCGGGGT CGAGGTGACC TTCGTCGATG GCACCGACCT TGACCAGTGG CGCGCGGCGG TTCGGCCGGG CACCAAGGCC GTGTTCTTCG AGTCGGTCTC GAACCCGACG CTCGAGGTGG CCGACATCGG CGCCATCGCC GCGATCGCCC ATGCGGTGGG CGCGCTGGTG ATCGTGGACA ATGTCTTCAC CACCCCCGTC TTTTCGACCG CGGTCCGGCA GGGTGCGGAT GTGGTGATCT ATTCTGCCAC CAAACATATC GACGGGCAGG GACGCGCGCT CGGCGGCGTG GTCTGCGCCT CGCAGCACTT CATCCGCAAG GTGCTCGAGC CCTTCATGAA ACATACCGGC GGCTCGATGA GCCCCTTCAA CGCCTGGCTC ATGCTGAACG GCATGGCGAC GCTCGACCTG CGCTGCCGGG CGATGGCCGA CACGGCCGAG AAGATCGCCC GGGCGCTCGA GGACGATGCG CGGCTCGTGC GCGTGATCCA CCCCTCGCTG AAGAGCCATC CGCAGCACGA GATGGCGAAG GCGCAGATGG ACCGCCCCGG CACGATGATC GCGCTTGATC TGGCCGCGGG CAAGGAGGCG GCCTTCCGCT TCCTCGACGC GCTGAAGATC ATCAAGATCT CGAACAATCT CGGCGACGCG CGCTCGATCG CGACCCATCC GGCGACAACC ACCCACCAGC GGCTGTCGGA CGCGCAGAAG GCCCATCTCG GCATCACGCC GGGCCTCGTG CGGCTGTCGG TGGGGCTCGA GGATGCGGAC GATCTGATTG CCGACCTGAA ACAGGCGCTC GACGTGATCT GA
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Protein sequence | MTKDWKTRTQ LVHGGSRRSQ YGEMAEAIFL TQGFVYDTAG QAEARFIETG EDEFIYARYG NPTTRMFEER IAAVEGTEDA FATASGMAAI HGVLTSIVRA GDHLVAARAL FGSCIYILEE VLGRFGVEVT FVDGTDLDQW RAAVRPGTKA VFFESVSNPT LEVADIGAIA AIAHAVGALV IVDNVFTTPV FSTAVRQGAD VVIYSATKHI DGQGRALGGV VCASQHFIRK VLEPFMKHTG GSMSPFNAWL MLNGMATLDL RCRAMADTAE KIARALEDDA RLVRVIHPSL KSHPQHEMAK AQMDRPGTMI ALDLAAGKEA AFRFLDALKI IKISNNLGDA RSIATHPATT THQRLSDAQK AHLGITPGLV RLSVGLEDAD DLIADLKQAL DVI
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