| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0612 |
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| Symbol | |
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| ID | 5083894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 610210 |
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| End bp | 611949 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640482169 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_001166823 |
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| Protein GI | 146276664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCA TCGTCGCCGT CATTTCGACG GGCAGCTTCG GGCCACATGC GGCGCTCGCG
CGGGAAGCCC TGCGCAAGGC CGCGCAGCTT GCGGGGCAGG GGATCGCGGT CGAGCTGCGC
ACGAAGGACA GCGTGACCGA TCCGCTGCCG CCCGAGGTGG TGAGCGGCGC GGGCCAGGTC
CTGCTGGTGG CCGAGCCGGA TGGGGCGGAT GCGGACGAGG CCCGCTTTGC CGGCCGCCCG
ACCGCTCGCG CCACGCTGGC CGACGTGCTG GAGGACGCGC CGGGCGTGCT GGCCCGTGCC
AGGAGCGGCG ACGCGGCCCC GGCGGCCGCC CCGGCGGCCA CGGGCGCGCT GAAGATCGTG
GCGATCACCT CCTGTCCGAC CGGCATCGCC CACACCTTCA TGGCGGCCGA GGGGCTCGTC
GAGGGCGCGC GGGCGCAGGG TCACCAGATC CGGGTCGAGA CACAGGGATC GGTCGGCGCG
CAGGACGAGC TGACGCCCGC CGAGATCGCG GCGGCGGACC TCGTGATCAT CGCGGCGGAC
AAGCAGGTCG AGCTTTCGCG CTTCGGCGGC AAGCGCGTGT TCTTCTCGCC CACCAAGCCC
GCGATCACGG ACGGAGCCGG GTTGATCCGC AAGGCGCAGC AGGAGGCGCG GGTTCAGGCG
GGCTCCGCCT CGGCCGAAGC CGCCGCGCCC GACGCCAAGA AGGTGGGCGT CTACAAGCAC
CTGATGACCG GCGTCTCCTT CATGCTGCCG TTCGTCGTCG CCGGGGGGCT GCTGATCGCG
ATCGCCTTCG CCCTCGGCGG GATCTACGTC TATGAGGACC AGTATGCCGG CACGCTCGGC
CATACGCTGT TCCAGATCGG CGCGAACGGG GCCTTCACGC TGATGGTGCC GGCGCTGGCG
GGCTACATCG CCTGGTCCAT CGCCGACCGC CCCGGTCTCG CCCCCGGCAT GACCGGCGGG
GTGATCGCGG GGACCATCGG TGCGGGCTTC CTCGGCGGGA TCGTCGCGGG CTTCATCGCG
GGCTACGGCG TCCTCTGGCT CAACCGCGCG ATCCGGCTGC CCAAGACGCT GCAGGGGCTG
AAGCCCGTGC TGATCCTGCC CCTGCTGGGG GCGGCGCTGA CCGGGCTCAT GATGTTCTAT
GTGGTGGGCG AGCCCACCGC GCGGCTGCTC GCCATCATCA CCGAGGCGCT GCAGGGGATG
CAGGGAACGT CGGCCGCCGC GCTGGGATTG CTGATCGGCG GCATGATGGC GGTGGACATG
GGCGGGCCGG TCAACAAGGC GGCCTATGCC TTCGCCACCA CGCTGATCGC GGCCAATGTG
CTGGAGCCGA TGGCCGCGGT GATGTGCGCG GGCATGGTGC CGCCCATCGC GCTGGCCGTG
GCCACACGCA TCATGCCCGG CCGCTTCACG CCCGAAGAGC GCGAGGCCGG CAACGCGGCC
TTCGTGCTGG GCCTTGCCTT CGTGACCGAG GGCGCGATTC CCTTCGCCGC GCGCGATCCG
CTGCGGGTGA TCCCGAGCCT CATCGCGGGC TCGGCGGTGG CGGGCGGCAT CTGCATGGCC
CTGGGCGTCG CGCAGCGCGT TCCGCATGGC GGGATCTTCG TGCTGCCGAT CCCCAATGCC
GTGTCCAATC TGGTGGGCTT TGGCGCGGCG CTGGTCGCGG GAACGGCGGT CACCGTGCTC
GCGCTCGCGC TGGTCAAGCG GCGGGTCGCC GTTCCGGCCA CGGTGCCGGC GGTGGTCTGA
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| Protein sequence | MTGIVAVIST GSFGPHAALA REALRKAAQL AGQGIAVELR TKDSVTDPLP PEVVSGAGQV
LLVAEPDGAD ADEARFAGRP TARATLADVL EDAPGVLARA RSGDAAPAAA PAATGALKIV
AITSCPTGIA HTFMAAEGLV EGARAQGHQI RVETQGSVGA QDELTPAEIA AADLVIIAAD
KQVELSRFGG KRVFFSPTKP AITDGAGLIR KAQQEARVQA GSASAEAAAP DAKKVGVYKH
LMTGVSFMLP FVVAGGLLIA IAFALGGIYV YEDQYAGTLG HTLFQIGANG AFTLMVPALA
GYIAWSIADR PGLAPGMTGG VIAGTIGAGF LGGIVAGFIA GYGVLWLNRA IRLPKTLQGL
KPVLILPLLG AALTGLMMFY VVGEPTARLL AIITEALQGM QGTSAAALGL LIGGMMAVDM
GGPVNKAAYA FATTLIAANV LEPMAAVMCA GMVPPIALAV ATRIMPGRFT PEEREAGNAA
FVLGLAFVTE GAIPFAARDP LRVIPSLIAG SAVAGGICMA LGVAQRVPHG GIFVLPIPNA
VSNLVGFGAA LVAGTAVTVL ALALVKRRVA VPATVPAVV
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