Gene Rsph17025_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0580 
Symbol 
ID5082885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp582605 
End bp583591 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID640482135 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_001166791 
Protein GI146276632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.127614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGATC GGGTTCTGGT GACGGGCGGC GCGGGCTACA TCGGCTCGCA CGCCTGCAAG 
GTGCTGAAGC GGGCCGGGTT CGAGCCCGTG ACGTTCGACA ACCTCTCGAC CGGCTGGGAA
CAGGCGGTCC GGTTCGGCCC GCTCGCGCGC GGCGACCTGA TGGACCGCGC CAGCATCGAC
GCGGCGCTCG AGGAATGGAA GCCCGTCGCG GTGATGCATT TCGCGGCCCT GTCGCTGGTG
GGCGAATCGA TGCGCGATCC GGCGACCTAC TGGCGGGTGA ACGTGAACGG CGCGCTGAAC
CTGCTCGAGG CGACCGTCGC GCAGGGCGTG AAGAACTTCG TCTTCTCCTC CACCTGCGCG
ACCTACGGCG ATCAGGATGG CGTGGTGCTG GATGAAGACA CGCCGCAGCG CCCGATCAAC
GCCTATGGCG CCTCCAAGCG CGCGATCGAG GAGATGCTGG CCAATTTCGG CGCTTCCTTC
GGTCTGAACC ACACGATCTT TCGCTATTTC AACGTGGCCG GCGCCGATCC CGAGGGCGAG
GCCGGCGAGC AGCACGAGCC CGAGACCCAT CTCATTCCGC TGATGCTGGA TGCGGTGGCG
GGCAAGCGGC CGGCGCTGAC CGTCTTCGGC ACCGATTATC CCACGCGCGA CGGTACCTGC
ATCCGCGATT ATGTTCATGT GATGGATCTG GCGCAGGCGC ATGTGCTGGG GCTGAACCGG
CTGCTTCAGG GCGGCACCAG CCGGGTCTTC TGCCTCGGCA CGGGGCGCGG CTTCTCGGTG
CGCGAGGTGA TCGAACAGTC GCGCGCCGTC ACCAACCGCG AGGTGCCGAT CGTGATCGGC
GCGCGCCGGG CGGGCGATGC GGCCGCCCTT GTCTGCGGGT CGGAGCGTGC CGTGCGCGAA
CTCGGATGGG AGCCCGAACG GTCCACCCTG CCGCACATGA TCGCCGACGC CTGGCGCTGG
CATCAGGCCC CGCGCTTTGA GCAGTGA
 
Protein sequence
MGDRVLVTGG AGYIGSHACK VLKRAGFEPV TFDNLSTGWE QAVRFGPLAR GDLMDRASID 
AALEEWKPVA VMHFAALSLV GESMRDPATY WRVNVNGALN LLEATVAQGV KNFVFSSTCA
TYGDQDGVVL DEDTPQRPIN AYGASKRAIE EMLANFGASF GLNHTIFRYF NVAGADPEGE
AGEQHEPETH LIPLMLDAVA GKRPALTVFG TDYPTRDGTC IRDYVHVMDL AQAHVLGLNR
LLQGGTSRVF CLGTGRGFSV REVIEQSRAV TNREVPIVIG ARRAGDAAAL VCGSERAVRE
LGWEPERSTL PHMIADAWRW HQAPRFEQ