Gene Rsph17025_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0577 
Symbol 
ID5082882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp579404 
End bp580150 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID640482132 
Producthypothetical protein 
Protein accessionYP_001166788 
Protein GI146276629 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.236121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCC ATTCCAAATG GGCGAACATC CAGCATCGCA AGGGCAAGCA GGACAAGCTG 
CGCTCGAAGA TGTTCTCGAA GCTGGCGAAG GAGATCACCG TCGCCGCCAA GATGGGTGAT
CCCGACCCCG ACAAGAACCC GCGCCTGCGG CTGGCGGTGA AGGCGGCCAA GGCCGTCTCG
ATGCCCAAGG ACGTGATCGA GCGCGCGATC AAGAAATCGC AGGGCGGCGA TGCCGAGGAT
TATTCGGAAA TCCGCTACGA AGGCTATGGC CCGAACGGCA TCGCGATCAT CGTCGAGACG
ATGACCGACA ACGTGAACCG CACCGCCTCG AACGTGCGCA GCTATTTCAC CAAGTTCGGC
GGCAACCTCG GCACCACCGG CTCGGTGAGC TTCATGTTCG ACCGGGTGGG CGAGATCACC
TACAAGCCCG CCGCCGGCGA TGCCGACACG GTGATGATGG CCGCGATCGA GGCCGGGGCC
GATGACGTCG AATCGGACGA GGACGGCCAC TGGATCTATT GCGGCGACAC GAGCCTCAAC
GAGGTGTCCG AGGCGCTGGA AAAGGTGCTG GGCGAGAGCG AGGAAGCCAA GCTCGTCTGG
AAGCCGCAGA ACCGCACGAA CGTCGATCTG GAAACCGCGC AGAAGCTGAT GAAGCTGATC
GATGCGCTGG AAGAGGACGA CGACGTGCAG ACGGTGACCG CAAACTTCGA CATCCCCGAG
GATGTCGCGG CAAGGCTCGA CGCCTGA
 
Protein sequence
MAGHSKWANI QHRKGKQDKL RSKMFSKLAK EITVAAKMGD PDPDKNPRLR LAVKAAKAVS 
MPKDVIERAI KKSQGGDAED YSEIRYEGYG PNGIAIIVET MTDNVNRTAS NVRSYFTKFG
GNLGTTGSVS FMFDRVGEIT YKPAAGDADT VMMAAIEAGA DDVESDEDGH WIYCGDTSLN
EVSEALEKVL GESEEAKLVW KPQNRTNVDL ETAQKLMKLI DALEEDDDVQ TVTANFDIPE
DVAARLDA