Gene Rsph17025_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0564 
Symbol 
ID5082869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp563929 
End bp564753 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content72% 
IMG OID640482119 
Producthypothetical protein 
Protein accessionYP_001166775 
Protein GI146276616 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.85427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC TGATCCTGGT CGCCGCGCTT GCGCTTGCGC CGCTTCCGGC GGCGGCGCAG 
GATCGCGCGC AGACGCTGGC CGACATCAAG GCCGAACTGT CCACGCTTCA GGCCCAGTTC
AACGATCTCA AACGCGAGTT GGTCTCGACC GGCGCCGCGA CCTCGGGGGC GGCGGGCGGC
TCGGCGCTTC AGCGCATGGA TGCGATGGAG GCGGCGCTTT CGCAGGTCAC CGCCAAGGCC
GAGGCGCTGG AGCTGAAGAT CAACCGCGTC GTCAGCGACG GCACGAACCG GGTGGGCGAT
CTGGAGTTCC GGGTCTGCGA GCTTGAGGAC GGCTGTGACA TCGGCGCCCT CGGAGAAACC
GCACCCCTGG GCGGGCAGGC CTCCGCGGCG CCCGTGGCAA CCCCCGCTCC GGCCCCGGCG
GCCGATCCTG CCGGCACCTT CGCCGTCAAC GAGAAAGCCG ACTTCGACCG GGCCCAGGAG
GTGCTCGGTC AAGGTGACTT TCGCTCCGCC GCGGACCTCT TTAAGGCCTT TGCCGAGACC
TACACGGGCG GCCAACTGAC CTACGAGGCG CACTATCTGC GGGGCGAGGC GCTGAGGCAG
CTCGGCGAGA CCGCGAACGC CGCCCGCGCC TATCTCGAGA GCTTTTCGGG CGACCCGGAC
GGGCCGCGCG CCCCCGAGGC GCTGCTGAAG CTCGGCCGCG CGCTCGGCGA CCTGCGCCAG
ACGCCCGAGG CCTGCGTGAC GCTGGCCGAG GTCGGCACCC GCTTCCCCGG TAGCCCCTCG
GCGGCCGAGG CGGCCACGGC GATGCAGGGG CTCGGCTGCA ACTGA
 
Protein sequence
MRTLILVAAL ALAPLPAAAQ DRAQTLADIK AELSTLQAQF NDLKRELVST GAATSGAAGG 
SALQRMDAME AALSQVTAKA EALELKINRV VSDGTNRVGD LEFRVCELED GCDIGALGET
APLGGQASAA PVATPAPAPA ADPAGTFAVN EKADFDRAQE VLGQGDFRSA ADLFKAFAET
YTGGQLTYEA HYLRGEALRQ LGETANAARA YLESFSGDPD GPRAPEALLK LGRALGDLRQ
TPEACVTLAE VGTRFPGSPS AAEAATAMQG LGCN