| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0562 |
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| Symbol | tolB |
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| ID | 5082867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 561957 |
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| End bp | 563291 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640482117 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001166773 |
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| Protein GI | 146276614 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.271593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT TCAGATCCCT CGCCCCGATG GGCCTTGCCC TGGCCCTGCT TCTGCCGGCG
GCGGCCCCCG CCCTGGCCCA GCAGGGGCCG CTGCGCATCC AGATCACCGA AGGCGTGATC
GAGCCCTTGC CCTTCGCCGT GCCGAACTTC GTGGCCGAGA CGTCGGGCGC CTCGCAGCTG
GCGCAGGACA TGGCCCGTGT GATCGCGGCC GACCTGTCGG GCACGGGGCT CTTCCGCGAG
ATCCCGGCCT CGGCCCACAT CAGCCGCGTG ACCAGCTTTG ACGCGCCGAT CGCCTACAAC
GACTGGAAGG CGATCAACGC GCAGGCGCTG ATCACCGGCT CGGTCTCGGC TTCGGGCGAT
CGGGTGGTGG TGAAGTTCCG TCTGCACGAC GTCTTCTCCG ACCAGCCGCT CGGCGAGGGG
CTGCAGTTCG CGGGCTCGGC CTCGGGCTGG CGGCGCATGG CGCACAAGGT GGCCGACGTG
GCCTACAGCC GGATCACCGG CGAGGGCGGC TATTTCGACA GTCGCGTGGT CTTCGTCTCG
GAAACGGGGC CCAAGAACGC CCGCGCCAAG CGCCTCGCGG TGATGGATTA CGATGGTGCG
AACGTGCAGT ATCTGACGGA CTCCTCGTCC ATCGTGCTCG CGCCGCGCTT CTCGCCCACC
GGCGACCGCA TCCTCTTCAC CTCCTATTCG ACGGGCTTTC CCCGGATCTA CCTGATGGAT
GTGGGCTCGC TCGCGACCCG CAGCCTTGCC GAGCAGCCCG GCACGATGAC CTTCGCGCCC
CGCTTCGCGC CCGATGGCCG GACGGTCGCC TTCTCGCTCG AACAGGGCGG CAACACCGAC
ATCTACACGC TCGACACCGC GAGCGGGACG CGCCGCCAGC TGACCAACTC GCCCTCGATC
GAGACCGCGC CGTCGTATTC GCCGGACGGC AGCCAGATCG TGTTCGAGAG CGACCGCTCG
GGCGGCCAGC AGCTCTACAT CATGCCCGCG GGCGGGGGCG AGCCGCGGCG GATCTCGAAC
GGAGCGGGCC GCTACGGCAC CCCGGTCTGG TCGCCGCGCG GTGACCTCAT CGCCTTCACC
AAGCAGCACC AGGGCCGCTT CCACATCGGC GTGATGCGGA CCGACGGCTC GGAGGAGCGG
CTGCTGACCG CCTCGTTCCT CGACGAGGGC CCGACCTGGG CGCCGAACGG CCGCGTGCTG
ATGTTCACCC GCGAGGGCGC GGGGGCGGGC GGGCAGCCGG CGCTCTATTC GGTGGATATC
TCGGGGCGGA ACCTCAAGAA GGTGCCGCTC AGCGTTCCGG CCTCGGACCC GGCCTGGTCG
CCGCTTCTGC CATGA
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| Protein sequence | MNLFRSLAPM GLALALLLPA AAPALAQQGP LRIQITEGVI EPLPFAVPNF VAETSGASQL
AQDMARVIAA DLSGTGLFRE IPASAHISRV TSFDAPIAYN DWKAINAQAL ITGSVSASGD
RVVVKFRLHD VFSDQPLGEG LQFAGSASGW RRMAHKVADV AYSRITGEGG YFDSRVVFVS
ETGPKNARAK RLAVMDYDGA NVQYLTDSSS IVLAPRFSPT GDRILFTSYS TGFPRIYLMD
VGSLATRSLA EQPGTMTFAP RFAPDGRTVA FSLEQGGNTD IYTLDTASGT RRQLTNSPSI
ETAPSYSPDG SQIVFESDRS GGQQLYIMPA GGGEPRRISN GAGRYGTPVW SPRGDLIAFT
KQHQGRFHIG VMRTDGSEER LLTASFLDEG PTWAPNGRVL MFTREGAGAG GQPALYSVDI
SGRNLKKVPL SVPASDPAWS PLLP
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